| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0925 |
|---|
| Symbol | |
|---|
| ID | 6377162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1186300 |
|---|
| End bp | 1187808 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642682058 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_001958019 |
|---|
| Protein GI | 189502302 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0113019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA TAGGAGCGAT TACCCAGATT ATAGGACCTA TTATAGATGT TAGCTTTGAG
AATAGTGGTA AATTACCTGC TATACTAAAT GCCCTTGAAG TTACTAAAGC AGATGGGCAA
AAGATAGTCT TAGAATGCCA GCAACATTTA GGCCAATATG CTGTTAGGAC CATTGCTATG
CATGAAACTG AAGGGCTAGT AAGAGGCATG AAAGTAGTTG ATACAGGTGC AGCTATCCAG
ATGCCTGTTG GTGAAGCTAT TCGAGGCAGG CTGTTTAATG TAATAGGTGA AGCAATCGAT
GGGCTTCCTC AGCCAAAAAC ACAACAAAAA CTTCCTATTC ATAGACCAGC TCCTAAGTTT
AAAGATATCT CTACTGCTAC TGAAGTATTG TATACAGGTA TTAAGGTTAT TGATTTATTA
GCTCCGTATG TAAAAGGTGG AAAAATAGGA TTGTTTGGAG GTGCTGGAGT AGGAAAAACC
GTTCTAATCA TGGAGTTGAT TGATAATATT GCTAAGTCAT ATGCAGGATT ATCTGTTTTT
GCCGGTGTAG GGGAAAGGAC ACGTGAAGGT AATGATCTAT TAAGAGAAAT GATTGAATCA
GGTGTTATCA ACTATGGTGA AGAGTTTAGA AAATCGATGG AGGCAGGTGG ATGGGATCTA
TCTAAAGTAG ACCGTGAGGC ATTAAACAAA TCTCATGCAA CATTGGTATT TGGACAAATG
AATGAGTCAC CTGGTGCGAG GGCAAGGGTG GCCCTAACTG GCCTTACTGC TGCAGAATAT
TTCCGCGATG GTAATGGACA AGAGAAAGGC AAAGATGTAC TTCTCTTTAT TGATAATATA
TTTAGGTTTA CACAAGCAGG GTCTGAAGTA TCCACACTAT TAGGTCGTAT GCCTTCTGCA
GTAGGTTATC AGCCTACTTT GGCTACTGAG ATGGGTGCTA TGCAAGAACG TATTACCTCT
GTAAAGAATG GTTCTATTAC TTCTGTACAA GCTGTTTATG TGCCAGCAGA TGACTTAACT
GACCCAGCGC CAGCTACAAC CTTTGCTCAC TTAGATGCCA CTACGGTACT TTCTCGTAAA
ATAGCATCAC TAGGTATTTA TCCGGCTGTA GATCCATTAG AATCCTCTTC GCGTATTTTA
AATCCAGAAG TACTAGGCGA AATACACTAT AATACTGCAC AACGTGTTAA AAATATTTTA
CAGCGCTATA AAGAATTACA AGATATTATA GCCATTTTGG GTATGGATGA GCTTTCAGAA
GAGGATGTGA AAATAGTTTA TAGGGCTAGA AGGGTACAAA GGTTCTTTTC GCAGCCTTTC
CATGTAGCTG AGCAATTTAC TGGGCTAAAA GGTATGCGCG TGAGCATTGA AGATACTATT
AAAGGATTTA ACATGATCAT TAATGGAGAG CTAGACCATT TACCAGAAGC AGCCTTTAAC
CTAGTGGGTA CCATCGAACA AGCTATTGAA AAAGGAGAAA AAATGCTTAA AGAAGCTATT
CCTAGTTAA
|
|---|
| Protein sequence | MSNIGAITQI IGPIIDVSFE NSGKLPAILN ALEVTKADGQ KIVLECQQHL GQYAVRTIAM
HETEGLVRGM KVVDTGAAIQ MPVGEAIRGR LFNVIGEAID GLPQPKTQQK LPIHRPAPKF
KDISTATEVL YTGIKVIDLL APYVKGGKIG LFGGAGVGKT VLIMELIDNI AKSYAGLSVF
AGVGERTREG NDLLREMIES GVINYGEEFR KSMEAGGWDL SKVDREALNK SHATLVFGQM
NESPGARARV ALTGLTAAEY FRDGNGQEKG KDVLLFIDNI FRFTQAGSEV STLLGRMPSA
VGYQPTLATE MGAMQERITS VKNGSITSVQ AVYVPADDLT DPAPATTFAH LDATTVLSRK
IASLGIYPAV DPLESSSRIL NPEVLGEIHY NTAQRVKNIL QRYKELQDII AILGMDELSE
EDVKIVYRAR RVQRFFSQPF HVAEQFTGLK GMRVSIEDTI KGFNMIINGE LDHLPEAAFN
LVGTIEQAIE KGEKMLKEAI PS
|
|---|
| |