Gene Aasi_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0838 
Symbol 
ID6377079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand- 
Start bp1062509 
End bp1063198 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content37% 
IMG OID642681977 
Producthypothetical protein 
Protein accessionYP_001957938 
Protein GI189502221 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.183627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATA CTGATACAAA ACGAATTTCG CGGCTAACTG CAATCCTTAC TCAATTACAG 
ACCAAACGCC TTTTGACTGC ATCTGAGCTT GCCTCCAAAT TTTCAGTAAG TATCAGGACC 
ATTTATAGAG ATATTAGGAC ACTAGAGCAA GCGGGCATTC CAATTATAAC AGAAGAAGGT 
AAGGGCTATA CGCTTATGGA ACATTACCGC CTTCCGCCAA TAATGTTTAC CGAAAGCCAA 
GCTAACGCTC TGATCCTTGC AGAACAATTA GTTCTAAAAA ACAAAGATGC TTCATTGATT 
AAAGAGTATT CAGAAGTGAT TGACAAAATT AAGGCTGTAT TAAGACACGA TGTAAAAAGC 
AAAGTAAACT TACTAACCGA ACGCACAAGA TTCACACAAA GCTTCAATAA TGAAAGAACT 
AGTAATAACT TATCAGACCT ACAATTTGCC CTGACAAATT TCTTCTTAAC GAAAATAGAG 
TATACCAATG GGGCAAAGCA ATCCACTCAG AGAATCCTTG AACCGTTTGC ATTACTAAGT 
ACAGCAAATT GGTTATTGAT AGCATGGTGT CGTTTACGAA ATGAGTTTAG ATTTTTTCGC 
CTCGACAGAA TAATAAAGCT TGAAGTACTT ACAGAAACCT TTACCCCGCA TAATATGACC 
TTACAAGAAT ATTTTGACAA GTACCATTAA
 
Protein sequence
MDYTDTKRIS RLTAILTQLQ TKRLLTASEL ASKFSVSIRT IYRDIRTLEQ AGIPIITEEG 
KGYTLMEHYR LPPIMFTESQ ANALILAEQL VLKNKDASLI KEYSEVIDKI KAVLRHDVKS 
KVNLLTERTR FTQSFNNERT SNNLSDLQFA LTNFFLTKIE YTNGAKQSTQ RILEPFALLS 
TANWLLIAWC RLRNEFRFFR LDRIIKLEVL TETFTPHNMT LQEYFDKYH