Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0749 |
Symbol | |
ID | 6377009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 956717 |
End bp | 957532 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642681895 |
Product | hypothetical protein |
Protein accession | YP_001957860 |
Protein GI | 189502143 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTAC CTATAGATCT TAGTAAGTAT TTTAGTCCCA TACAGCCAAC CATCAAAGGG ACAGATAAGC AAGTAGCCTA CAGAGAGTGT TTACCTGATA TAAGGTTGCA AAGCTACATT TATTGTTATT GGGAGCTCAA GACCAACCAG GCTCTTGCCA ATAAGTTTTA TTATAGGGTA GTAGCTGATG GCTGTATGGA TATATTTTTT GAACTCAATC AGCCAGCTGA AAATTATGTA ATGGGCTTCT GCAAGCAATA CACAGAGTTC TTACTTAGCA ATTGTTTTCA TTATATCGGT ATTAGGTTCT TGCCAACCAT GTTTCCACAA ATTTTTAAGA TAAATGCTGC TGAAATTAGT AACCGATTTG AGAGATTGGA AGTTGTCGCG TCCAAAACTT CCACTTTTAT TGGAGACTTT ATTTCACCAG ACCAAACTTT TGAGCAGATC AAGAACCTAT TTGACCAATA CTTTTTGTAC ATGATCTCGA ATGTAAAGTG GAATGAAGAT GGGAGGCTTT ATAATGCTAT CGATATTATT CTCAAGAAAG CTGGTGTTAT AAATGTTGAG AAAGATCTAG ATACAGGAAT AAGTTTAAGA CAACTACGTA GGCTGTTTGA ATTTTATATT GGTGATACTG CTAAGACCTT CAGTAAAGTA GTTCGATTTC AGAACATACT AAGAGTCAAG CCCTCACAGC AAAGTTTAAG GGAAAATAAA TTGTTTTTTG ATGTAGGTTA TTATGATCAG GCACACTTTA TCAAGGAATT TAAGAATTTT TATGGTGTTA CTCCCAGTCG GGCGTTTGAA AGATGA
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Protein sequence | MQLPIDLSKY FSPIQPTIKG TDKQVAYREC LPDIRLQSYI YCYWELKTNQ ALANKFYYRV VADGCMDIFF ELNQPAENYV MGFCKQYTEF LLSNCFHYIG IRFLPTMFPQ IFKINAAEIS NRFERLEVVA SKTSTFIGDF ISPDQTFEQI KNLFDQYFLY MISNVKWNED GRLYNAIDII LKKAGVINVE KDLDTGISLR QLRRLFEFYI GDTAKTFSKV VRFQNILRVK PSQQSLRENK LFFDVGYYDQ AHFIKEFKNF YGVTPSRAFE R
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