| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0652 |
|---|
| Symbol | |
|---|
| ID | 6376672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 841570 |
|---|
| End bp | 842364 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642681807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957777 |
|---|
| Protein GI | 189502060 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1624] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00159] conserved hypothetical protein TIGR00159 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.20271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCAT ATAACCTAGG ATTATCAACT ATTACGCCAG TTGATATTAT AGATATTTTA
CTTGTTAGCC TATTACTTTA TCAACTGTAT AAGCTGATCA GAGGAAGCGT TGCTGTTAAA
ACAATCTTAG GATTCTCAAC AGTTTATCTT ATCTCCTGGC TAGCTGATAA AGTAGGAATG
CGGTTACTTG GACAAATATT ACGACAGATT ACAGGCATAA GTGCTATAGC AACTGTTGTA
CTTTTCCAAT ACGAAATTAA AAAATTCTTT TCTACGCTGG GCAGTTTGTT TTTTTTGAGT
GGGAAACAAC TATTAGTACG CATTCCTGGA CTAAAAAAGA AATCTGATTT ATCTTTTAAT
ATTACAGCTA TTGTAGAAGC ATCTAAAATA CTAGGTGGTA CTAATACAGG CGGCCTTATT
GTCCTATCAA ACACAGAAGA TTTAAAATTT TATATAGAAT CTGGAGATCT CTTAGAGGCT
TTAATCTCCA AAAGGCTACT TTTAGCTATA TTTAATGAGG AAAGCCCGCT ACATGATGGC
GCAGTTATTA TCTACCAAGC TAAAATAATA GCAGCCCGCT GTATTTTACC TGTTACAGAA
CGACAAAACT TGCCAGCACA ATTTGGGCTT AGACATAGGG CTGCCATTGG AATGTCAGAG
GTTACTGATA CTTTAGTTGT AATCATTTCA GAAGAAACTG GACAAATTTC AGTAGCACGT
AAAGGCATAT TAGAACATAA CTTATCAGCA CAAGAGTTAC GTATAGCCAT TAATGAGTAC
TTGAAAGAAG GCTAA
|
|---|
| Protein sequence | MIAYNLGLST ITPVDIIDIL LVSLLLYQLY KLIRGSVAVK TILGFSTVYL ISWLADKVGM
RLLGQILRQI TGISAIATVV LFQYEIKKFF STLGSLFFLS GKQLLVRIPG LKKKSDLSFN
ITAIVEASKI LGGTNTGGLI VLSNTEDLKF YIESGDLLEA LISKRLLLAI FNEESPLHDG
AVIIYQAKII AARCILPVTE RQNLPAQFGL RHRAAIGMSE VTDTLVVIIS EETGQISVAR
KGILEHNLSA QELRIAINEY LKEG
|
|---|
| |