| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0649 |
|---|
| Symbol | |
|---|
| ID | 6376357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 836457 |
|---|
| End bp | 836786 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642681804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957774 |
|---|
| Protein GI | 189502057 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.698912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG AAAAAGACAT ACATCTTACT GACGCAGAAT TTGACAAAGC ATTGCAAAGC
TCAAATCCTG TATTAGTTGA TTTCTGGGCA CCTTGGTGTG GACCCTGCCG TATGATGAGC
CCTATTATAG ATGAACTTGC AAAAGAGTAT GAAGGCAAAG CAGACATCTA TAAACTTAAT
ATAGACGAAA ATTCTCAAGT ACCTACCAAA TATAGTATCA GAAGCATTCC TACCATGATC
ATCTTTAAAA ATGGTCAAGC TGTAGAGCGT ATAGTAGGTG GACTCAGTAA AATAGCATTA
GAGGAAAAAC TCGATATATA TACATCATAA
|
|---|
| Protein sequence | MNKEKDIHLT DAEFDKALQS SNPVLVDFWA PWCGPCRMMS PIIDELAKEY EGKADIYKLN
IDENSQVPTK YSIRSIPTMI IFKNGQAVER IVGGLSKIAL EEKLDIYTS
|
|---|
| |