| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0563 |
|---|
| Symbol | |
|---|
| ID | 6376418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 722840 |
|---|
| End bp | 726205 |
|---|
| Gene Length | 3366 bp |
|---|
| Protein Length | 1121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642681718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957693 |
|---|
| Protein GI | 189501976 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases
[COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0552395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTA TGCTAAAAGA TTACTTAGAT ATCATACTAT TCACTACATT TTTACTTGTT
AACTTAATAA TAGGCCTGAT CGCTGGTCGA CGTGTAAGAA GCTTGCGAGA TTTCTCCATA
GGTAATAAAG ATTTTACTAC AGCTACGGTA ACTTCTACCA TTGTAGCTAC CTGGTTTGGA
GGTGGATTTA TATTTTATGG ATTACAAAAT GCTTATACAA GTGGACTGCA ATATATTATA
CCACTTCTGG GATCAAGTTT ATGTTTGCTA TTTACTGGTC AAGTACTTGC TGTACGTATG
GGCGAATTTT TAAATAATCT TTCTGTTGCC GAGGCAATGG GAAATCTATT TAGCCGATTG
GTACGTATAA TTACTGCTAT TAGCGGAATA CTTGGTGGAA TTGGTTATAT AGCCATTCAG
TTTCAGGTGA TTGCTAAAAT GTTAAACTTC CTCTTAGGAT TTGAGGGGCC TTGGGTTACT
GTTGCAGCAG CTTCTATCGT CATTATTTAT TCAGCTTTCG GTGGTATCCG ATCTGTTATT
ATTACAGATT TATTGCAGTT TATTGTCTTT AGTATTTTTA TCCCTATTCT TGCCTTGGTG
GTTTGGAACC ACCTAAAAAA ACCTGGACAA GTAGCACATA CCTTAGTTAC CAATCCGGTA
TTTAACTTCA AGGAAATGCT AGGTTGGAAC CCTAAATTTT TATCTGCACT AGGCTTAGTG
CTTTATTTTG CTATTCCGGG CATAACTCCT GCTATATTCC AGCGCGTAAC TATATCTAAA
GATCTTAGAC AAGTTAAAGA TTCTTTTACC TATGCAGCTG CAAGTTCGTT ACTGATGGTT
GCTTCATTAG CTTGGATTGC TATTTTATTA CTGTCAGATA ATCCTAATCT AGAGTCTGGT
AGTCTTGTAA ACTATATTAT TACAACCTAT GCTTATCCAG GACTGAAAGG ACTTATTGCT
ATTGGTATTA CAGCCATGGC TATGTCTACA GCAGACTCTT ATCTTAATTC ATCTGCTGTG
TTAGCAGTTA ATGATATTCT GAAACCACTG CAGCTTTATT GGAAAGATTC TATTAAGATC
GTTAGAGTTT TTTCCTTTGT TTTAGGAATT TTTGCATTGT TATTAGCGCT TCGCAGTACA
GACTTACTAC AATTGATGCT ACTGTCTGGC AGCTTTTATA TGCCTATTGT TACTGTACCA
CTCTTATTAG CCATTTTTGG TTTTCGAAGT AGTAGCAGAT CAGTTCTTAT AGGAATGTCA
GCAGGCTGTA TAACTGTGAT ATTATGGAAT AAGTTTTTAA CTCATACAGG CATGCAAAGT
CTTATCCCTG GTATGATCGC TAACTTAGTA TTCTATGTAG GCAGTCATTA TATACTTAGG
CAACAAGGGG GCTGGATAGG CATACGAGAT AGAGAACCCC TTTTGGCAGC TCGGCAAGGC
CGTAGAGAGG CATGGCAGAA ATTTATTTAT AAGGTTAGAC ATCCACAAAT CTATACTTAC
TTACAAAAAA ATCTGCCGGC TTATGAAGTT GTTTATACGC TTTTTGCCAT TTATGTGATT
GGTGCCACGT ATGCTTCTTT TTACACCATA CCAGAGTCAA CAGTTGCCAA TTATCAAAAG
CTCTATGATA TTGCTGCACA TTCTGTTTTA GTTATGACGG CTGGGTTTCT TACCTATCCT
GCTTGGCCCC CTACTTTTAA AGCCAAATGG TTCATCACCT TTGCTTGGCC AGCGGGTATC
CTGTATGTAC TCTTTATAGT AGGGACTATC TTAGTACTTA TGAGTGGCTT TCATGAAGTA
CAAGTCATGA TTTTTCTAAT TAATCTAATC ATGACTGCAT TTTTACTTTC CTGGCCCCTA
ATGTTATTTG TTTCTTTGGT AGGTATAATT ATTGGCTGCC TAGTTTTTTA CATGTATTGT
GGGGATTTAT ATGCTTGTAC CAGTTCAACT GGTTCAGGGC AATTTAAAGT TATTTATGGC
ATTCTTTTGT TTAGTAGCTT TCTTATTGCT CTATTCAGAT TTAAACAAAG CCAAACAAGG
CTCGAGAATA AGAATGTTTA TTTAGAAAAT ATATATAAAC AATTAAAAGA TGAACTATCT
GAAATTTTAG GCTATAAAGA GACGCTTGTT AAAGAACTAA AAGAAGATGA GTTGGCTTTG
TTTGGAACAA CCGCAGCTGC TTACATGCAA CAAGCCATTT ATCGTATTAC CGATTATGTA
AGATTAGAAG TAAGCCAGAT CAAACTAGAA GATCTTATAG TAGAAATTAA AGATATACTC
AAGTTAAAAG ACTTTGATGG ACAGTCCCCT CAACTAAGCA GTAAAAAATA TACTAAAGAG
GAGTCAATCT ATGCGGATGC TGATAAGATC AAACAAGTGC TTGCTGACAG TATCTGTTAT
ATCCATAAAC ATAATCTATC CAATAAAACT ATTGTTATTG CACTTGAAGA TGCCATGCTA
GGCCATAGTG TAGAACATAT GAAAGATTAT ACACGAAAAC TAAAGGCTAT TAAAATTACC
ATTACAACCC AGGAACTATT ATCTAATACC TCTAATCGTG TATATATGTT TGATCAAGCA
CCTTCTATTA GTCGGATGGC TGGGGATGGA GATAGAAAAG CTTTGTTAAA TAATGCACGT
ATTATCGATG CTCATTATGG TTATGCAGAG CTAGATAAGG AAGATACCCA TATATATGTT
CTTCCTATCA ATGTACGTGA AGTAAGGGGA AAGGTTATGG AGCTTTTAAG GGCGCCTGCA
GTGGCCAGTG AGGAAGAAGT AAAGCATCCT TTAGCCATAC AGCTGGAGGA AGAGCTACTT
AATAAAACAA AAACTGCTAA ACTTGATACA AATGTTATAG AAAAATCACT TAATACCATT
AAGAGGTATC ATGCAGGAGT TAAAAGAAAA TCAGGAGAAC CTTTCTTCAC TCACCCAATA
GCTGTAGCAT TGATCTTGCT AGATTATTGC AAAGATCAGG ATGCCGTAAT AGCAGCACTA
CTACATGATA CAGTGGAAGA TACTAGCTTA TCTATAACCC ATATTAAGGC TATGTTTGGA
GAAAAAGTAG CTTTTATAGT AGGAAAGGTA ACCAACCTAG AGGATAAAAT AAGAAGGCTA
AGCCTTGAGG AACATGAAAA TATTAAAAGG TTAATTAACT ATGAAGATGA GCGGGCGGCT
TTTGTAAAAT TAGCTGACAG GCTTCATAAC ATGCGTACCA TTGAAGGACA TTTGTCCTTA
TCTAAACAAA AGCATATAGC CAATGAGACC TTGCTTTTCT TTGTACCACT TGCCAACCAA
TTAGGGGTAG ACCATGTGGC ACAGGAATTA GAAAAACTTA GTTTGGAAGT ATTGGCTAAG
AAATGA
|
|---|
| Protein sequence | MDLMLKDYLD IILFTTFLLV NLIIGLIAGR RVRSLRDFSI GNKDFTTATV TSTIVATWFG
GGFIFYGLQN AYTSGLQYII PLLGSSLCLL FTGQVLAVRM GEFLNNLSVA EAMGNLFSRL
VRIITAISGI LGGIGYIAIQ FQVIAKMLNF LLGFEGPWVT VAAASIVIIY SAFGGIRSVI
ITDLLQFIVF SIFIPILALV VWNHLKKPGQ VAHTLVTNPV FNFKEMLGWN PKFLSALGLV
LYFAIPGITP AIFQRVTISK DLRQVKDSFT YAAASSLLMV ASLAWIAILL LSDNPNLESG
SLVNYIITTY AYPGLKGLIA IGITAMAMST ADSYLNSSAV LAVNDILKPL QLYWKDSIKI
VRVFSFVLGI FALLLALRST DLLQLMLLSG SFYMPIVTVP LLLAIFGFRS SSRSVLIGMS
AGCITVILWN KFLTHTGMQS LIPGMIANLV FYVGSHYILR QQGGWIGIRD REPLLAARQG
RREAWQKFIY KVRHPQIYTY LQKNLPAYEV VYTLFAIYVI GATYASFYTI PESTVANYQK
LYDIAAHSVL VMTAGFLTYP AWPPTFKAKW FITFAWPAGI LYVLFIVGTI LVLMSGFHEV
QVMIFLINLI MTAFLLSWPL MLFVSLVGII IGCLVFYMYC GDLYACTSST GSGQFKVIYG
ILLFSSFLIA LFRFKQSQTR LENKNVYLEN IYKQLKDELS EILGYKETLV KELKEDELAL
FGTTAAAYMQ QAIYRITDYV RLEVSQIKLE DLIVEIKDIL KLKDFDGQSP QLSSKKYTKE
ESIYADADKI KQVLADSICY IHKHNLSNKT IVIALEDAML GHSVEHMKDY TRKLKAIKIT
ITTQELLSNT SNRVYMFDQA PSISRMAGDG DRKALLNNAR IIDAHYGYAE LDKEDTHIYV
LPINVREVRG KVMELLRAPA VASEEEVKHP LAIQLEEELL NKTKTAKLDT NVIEKSLNTI
KRYHAGVKRK SGEPFFTHPI AVALILLDYC KDQDAVIAAL LHDTVEDTSL SITHIKAMFG
EKVAFIVGKV TNLEDKIRRL SLEEHENIKR LINYEDERAA FVKLADRLHN MRTIEGHLSL
SKQKHIANET LLFFVPLANQ LGVDHVAQEL EKLSLEVLAK K
|
|---|
| |