Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0548 |
Symbol | |
ID | 6376386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 704834 |
End bp | 709180 |
Gene Length | 4347 bp |
Protein Length | 1448 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642681702 |
Product | hypothetical protein |
Protein accession | YP_001957678 |
Protein GI | 189501961 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000263012 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTATAGCA CTTCTAAAAG AATCATAGCT TTTATTTTAC TGAGTAGTCA GCTACTAACA CTAACCAGTT GTGGTGATAA TTTCAATATT CCTATAGAGC AGCAAATAGC TCATGGACAT AAGAAGGCAG ATAAGGAACC GAGCAAAGTG GGTGCCTTAG TTCCCTTGGT AAATGGATTA GAAAGATACG TTGCCGAGAC AAAGGATAAA AGAGAATCCA CTTTAAGCCA ATCTTTAACC AATCAGTTGC CCTTAGTTGA AAGTAATAGT GCTTCTGCCA CAGAAGGTAA AGCTCTCTTT GTAGGACGCT CTAAAACTTT AAAGAAGAAT AAAGAGCAGA AGTCGGTATC GAGTCAAGCA AAAACTTTTA CAACGCCGGT TTATATAGAT AGACCCACAG GTTACAGTAG AAAGCTTACT CACGATAAAG CTATAGGGGA CAAGCATTTT ACTACCTTAA ATAAGAGTAA GGATTTAGAT TCTTATAGAG AGCAAGCTCG AGCCAGCCAG AAACAAGTTA GTGAGCTTAG CGATATAGCA TTAAATGTTA CTGTTGCTGA GCTTCTTACA ATAGACCAAG GTTTAATAGC AAAAGGAGGC CATCAAGTAT ATCTAACCGT TGTAGAAGGC AAGTGGATGG CAATTGTTAA AGAGAATGCT CCTATAGGTT TTAGTAGAAC GCAGTATTTG GATTTATATC TAGCACCTGG TTTTACAACC AACCAGTTAA GTAAACATAG CCCTGAATGG CAAGAGGCAC ATATAGGAGT AGTATTTCCT GAAAAAAGTT CAACTGGCAA AGGGTATGTA TATATAGGTG ACGGGGGGCT GCTCGGTGGT GGGAATAGTG GTTCCAAAGG AGGCGGTGGA AATGATAGCG ATAGGACATC TAGCAGAAGT GAATCTAGTG AGAGGAGTAC ATCTGGCTCT AGCCACAGTT CAAGTAGTAG CAGTGGTAGA GCAAGTCATA ATATTGGAAG CTCACATAGT AGTTTCAGTA TGCCAAAAAC TTCATCTTCC AGTTCCCATC ATCGAGATAG CTTTAAGGAT TTTTGTAATA AGAGTTCAGC TAATGTTTCA GCTTCGTTAT CTTCTGCAGG TATAAAGCAT GATACCCATA GCACTTCCCA TACTAGTGAT AGTTTTAAGG ATTTTTGTGA TAAGAGTTCA GCTAATGTCT CAGCTATGTT ATCTTCTGCA GGTATAAAGC ATGATACCCA TAGCACTTCC CATTCTAGCT TCTCCAGCCA TACTAGTTCA TATTCTAGCA GCAGGGCATC TAACCAAGCT GCTAGTAGCA GTAATAGTGA AAGTAAGCCT GCTGCTTCTA AGGAGTCATC CTCTTCAAGC AAAGAATCTA AAGCCCCCCA TCTTACCCTA GAGAATGCAG CTACGGAGGT GAGAAAGCAC ATACAAGAGG CTAAAAATGA TGGTCCTAAA GCTACGAGTG TATCAGCCAG CCAGCAACAA CAAGCAAAAG GGGAGCAACT ACTTAAACAG CTACGTGAAA TCAAGCAACA ACAGGAACGG TCGTATAGCC AAACACAGAC CGCTTACATT ACACCAGGTA ATTCTGAAAT AGGGAATAAG CTGTTGTTAG ACCAGCTAAC CAAAAAAGGT CAAGAATTGT CTACTTTAAA AGAATTAGAG TCAGAGCTAA CACAAAGCTT AGAGCGCGAG CGTCCAACTA GCCATTATGA GGAAACAAGA AAAGAATCAA TACTAGCTAG TGCTACAACT ACACCAAAAG AGATTAAGGT AAAAGATAAA GGAAAAGAAA AGGATACAAG CTTGACACCT GGTACTACCC AAGCAACAAA TAACCTTCAT AGTACAACCC TATCTTCGTC TGGGGACATT TCTACTGCTA CAAGTACTAC TGAACCACTA CTCAGCACAC CCACTAAAGG TCCAGCAGTT AAAGTTGAGA GTGGTACACG TAAGACAAAA ATACCCTACA ATGATAGAGC GGACAGTTTT AGCTATGACC ACTACTCTTC AAGCACTAGC ACAAATACAC CTGCTGTATC AGCTACAGAG CCTACTAACC CGGCTACATC TAGTACTACT TCCACTAGTA CTACTGATAA AAGTGAAGCA GAAATTCATA ACCAGTGGAG TGATTTGTTA AAGGAAATAC AAGTCCAATT GGGACATTCC AAAATACAAG GTTTAGCAGA CGCTCTATAT CTACAAAAAC AGGCTAGATT CTATATAGAA AAATTAAAGT CGTATGAAAA ATATAAATGC ATTAGCAGAT CTTCGCTCGA GCAAGCACTC AATGAGCTGG AAAAGCTATC TGTACAGGTT GAAGCTGCCC TGGATAAGGA GAGGTATAAT GCAGTCGTAG GTGAAATCAA GCAAGTGTTG GATGCAAGAA TAGAAACTAT TAACAGGCTA CAAGAGGAAG AAGCAGACTC AGCTATTATC ATAGCAACGG CACAAGAGAT AAGACCTCAT GTAGAAGCAG CTATAAAACG ATTGGAAGAT TTCCCAACTA AACAATATAA GACACCTAGT ATAGAGAACT TGAAAGAAGC TAAAAGACAA CTTGAAGGGG TGATTAGAGA TTATACTCAC AGGAAAGTTT TATGGGATAA GTACAAGTCA GCTTTTAGCT ATGCAGCCAA GCATGTTTCA AAAAGGATAG AGCAAGAGCA AGAAGAATTA GCTAAGAGCA TAGGAAAGTC AGTCGAAAAG CCTGAAATAA CTATAACCAA TAAGTCAGGT ATAACCATAG CGCAACTAGA GGAAATTTTT CCAGAAGACT CCAGCAATAA CTTCAATTTG CAAAAACTGA TAGATACTTT AGATATAACT GTTAATTTCC CAGCAGCAGA AGAGAATGCT AACAGTAGCG AGGAGGATGA AGAAGAAGAA AGGCAAGGTG TAGAGGAGCA TTTAGAAAGA GAAGCTAAGT ACGAGAAAAC AGTAAGCCAA AAGGAAGAAC AAGAAAGGGC TAGTAGCCAA GCAGGTATAA ATGAGAAAGA GAAAGAATCA GCAGCAAAAA GGCAAGCCAG AAAAGAACAA AGAAGAGCTA ACCAAAAAGC CAGAAGAAAA GAAGCATCTC CCAAAAAAGC CCATGAAAAA GAGCTGATAA AAATAGGACA AGCTAAAGAG CAACTTAAAA GCTTGGTTAA AGATCAAGTG AAATCTTGTG TAGAGGATGC TGAATTTACT AATTGTAGAG TAGTATTATT GATGATCGAT GAGAAGCTCA AAAAAGAACC CAATAATAAG TCTTTACAAG CGTTAAGGGT AAAACAGCTA GAGAAATTCC AAAGCCACCC GCTTTATCAG CAAGCTGTAG AGTTAGGCAT AGAAGCAGCT GCATTGAGAA GAGAAGCGGA GGAAAGCGGC ACAGATGAAT TGATAGAAAG TGCAGAATTA GACTATAAAA TATTAGCCGG TATAGGCAAG TCACGTGAAT TTCGGAAAGA AGCAGAAGAG ATTAGAGATA ATATCATTAA CCCTTTACGG GATCTACTAG GCTGCCCACA TACATCAAAA GGATTAAGAA GGGCAGCAGA AGGTTTAAAA GGTTTTGGGG AAAGCTTTTA TGATACTGGA AAAGCGTTTA CAGTAGATAT GCCTATACTG TTGGGTAAAT TGGGGGTGAG GGGAGTAGAA TCATTGGTGA AGTGGGAAGA TAAGTTAGGA GTCAAAGAAG GCTGGGCTAA CCTAGGAAAA GCTTGTAAAT GCATATTTGA TCAGACAAAG CAAGACTGGG AAGATCCAGC AGCTTATAAA GCTCGTATGC AGGCTGTCCA AGAAGTAAAA AGTAGGCACG ACTTTTTCTG CCGAGCATTT GATGCAGAGA ATTATCATTT AGGCCAAGAT AAGGCATTGG GATATATGAC AGCAGAGATA GTGCAAGCAC TCTTTGGTGG AGAGATTATC AAAGGAACCA CTAAAGGTGC TACCAAGGGT GTTGAGTTTA TTAAGAAAAT CCAGCAAGGC GCTAAAGTAG AGAAGGCGGT AGTAGAAGGG GTGAAAGGAG CAGTTAATAT TGATTTAATG AATAAAGGGA AACAATTTAA AACAGCACAT GAGATTGCTA GAGAAGGAGG TAAGCATGCT GGTATGTATA GAAGCAGTAT ACAATTGCCT GACAAGCAGC TAGAAAAAGC CCTTAAGTCT CTTGAAAAGA GTATAGAAAA GCATAAAAAC TTAATAAAAG ACCCAGCAAG ATATCTAAAA GAATATGGAA AAGACTTAGA AGGGCCTTGG GATATGTTAA GAGCTGAAAG AAGGCAAGCT TTGATAGAAA AAATTTGGCC GAAAGAGATA AAGAACTTCA AAGAGCAAAG GGAAATTATT AAAGGCATTT TAAATAGTAG GAAATGA
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Protein sequence | MYSTSKRIIA FILLSSQLLT LTSCGDNFNI PIEQQIAHGH KKADKEPSKV GALVPLVNGL ERYVAETKDK RESTLSQSLT NQLPLVESNS ASATEGKALF VGRSKTLKKN KEQKSVSSQA KTFTTPVYID RPTGYSRKLT HDKAIGDKHF TTLNKSKDLD SYREQARASQ KQVSELSDIA LNVTVAELLT IDQGLIAKGG HQVYLTVVEG KWMAIVKENA PIGFSRTQYL DLYLAPGFTT NQLSKHSPEW QEAHIGVVFP EKSSTGKGYV YIGDGGLLGG GNSGSKGGGG NDSDRTSSRS ESSERSTSGS SHSSSSSSGR ASHNIGSSHS SFSMPKTSSS SSHHRDSFKD FCNKSSANVS ASLSSAGIKH DTHSTSHTSD SFKDFCDKSS ANVSAMLSSA GIKHDTHSTS HSSFSSHTSS YSSSRASNQA ASSSNSESKP AASKESSSSS KESKAPHLTL ENAATEVRKH IQEAKNDGPK ATSVSASQQQ QAKGEQLLKQ LREIKQQQER SYSQTQTAYI TPGNSEIGNK LLLDQLTKKG QELSTLKELE SELTQSLERE RPTSHYEETR KESILASATT TPKEIKVKDK GKEKDTSLTP GTTQATNNLH STTLSSSGDI STATSTTEPL LSTPTKGPAV KVESGTRKTK IPYNDRADSF SYDHYSSSTS TNTPAVSATE PTNPATSSTT STSTTDKSEA EIHNQWSDLL KEIQVQLGHS KIQGLADALY LQKQARFYIE KLKSYEKYKC ISRSSLEQAL NELEKLSVQV EAALDKERYN AVVGEIKQVL DARIETINRL QEEEADSAII IATAQEIRPH VEAAIKRLED FPTKQYKTPS IENLKEAKRQ LEGVIRDYTH RKVLWDKYKS AFSYAAKHVS KRIEQEQEEL AKSIGKSVEK PEITITNKSG ITIAQLEEIF PEDSSNNFNL QKLIDTLDIT VNFPAAEENA NSSEEDEEEE RQGVEEHLER EAKYEKTVSQ KEEQERASSQ AGINEKEKES AAKRQARKEQ RRANQKARRK EASPKKAHEK ELIKIGQAKE QLKSLVKDQV KSCVEDAEFT NCRVVLLMID EKLKKEPNNK SLQALRVKQL EKFQSHPLYQ QAVELGIEAA ALRREAEESG TDELIESAEL DYKILAGIGK SREFRKEAEE IRDNIINPLR DLLGCPHTSK GLRRAAEGLK GFGESFYDTG KAFTVDMPIL LGKLGVRGVE SLVKWEDKLG VKEGWANLGK ACKCIFDQTK QDWEDPAAYK ARMQAVQEVK SRHDFFCRAF DAENYHLGQD KALGYMTAEI VQALFGGEII KGTTKGATKG VEFIKKIQQG AKVEKAVVEG VKGAVNIDLM NKGKQFKTAH EIAREGGKHA GMYRSSIQLP DKQLEKALKS LEKSIEKHKN LIKDPARYLK EYGKDLEGPW DMLRAERRQA LIEKIWPKEI KNFKEQREII KGILNSRK
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