Gene Aasi_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0548 
Symbol 
ID6376386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp704834 
End bp709180 
Gene Length4347 bp 
Protein Length1448 aa 
Translation table11 
GC content39% 
IMG OID642681702 
Producthypothetical protein 
Protein accessionYP_001957678 
Protein GI189501961 
COG category[T] Signal transduction mechanisms 
COG ID[COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.63012e-09 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTATAGCA CTTCTAAAAG AATCATAGCT TTTATTTTAC TGAGTAGTCA GCTACTAACA 
CTAACCAGTT GTGGTGATAA TTTCAATATT CCTATAGAGC AGCAAATAGC TCATGGACAT
AAGAAGGCAG ATAAGGAACC GAGCAAAGTG GGTGCCTTAG TTCCCTTGGT AAATGGATTA
GAAAGATACG TTGCCGAGAC AAAGGATAAA AGAGAATCCA CTTTAAGCCA ATCTTTAACC
AATCAGTTGC CCTTAGTTGA AAGTAATAGT GCTTCTGCCA CAGAAGGTAA AGCTCTCTTT
GTAGGACGCT CTAAAACTTT AAAGAAGAAT AAAGAGCAGA AGTCGGTATC GAGTCAAGCA
AAAACTTTTA CAACGCCGGT TTATATAGAT AGACCCACAG GTTACAGTAG AAAGCTTACT
CACGATAAAG CTATAGGGGA CAAGCATTTT ACTACCTTAA ATAAGAGTAA GGATTTAGAT
TCTTATAGAG AGCAAGCTCG AGCCAGCCAG AAACAAGTTA GTGAGCTTAG CGATATAGCA
TTAAATGTTA CTGTTGCTGA GCTTCTTACA ATAGACCAAG GTTTAATAGC AAAAGGAGGC
CATCAAGTAT ATCTAACCGT TGTAGAAGGC AAGTGGATGG CAATTGTTAA AGAGAATGCT
CCTATAGGTT TTAGTAGAAC GCAGTATTTG GATTTATATC TAGCACCTGG TTTTACAACC
AACCAGTTAA GTAAACATAG CCCTGAATGG CAAGAGGCAC ATATAGGAGT AGTATTTCCT
GAAAAAAGTT CAACTGGCAA AGGGTATGTA TATATAGGTG ACGGGGGGCT GCTCGGTGGT
GGGAATAGTG GTTCCAAAGG AGGCGGTGGA AATGATAGCG ATAGGACATC TAGCAGAAGT
GAATCTAGTG AGAGGAGTAC ATCTGGCTCT AGCCACAGTT CAAGTAGTAG CAGTGGTAGA
GCAAGTCATA ATATTGGAAG CTCACATAGT AGTTTCAGTA TGCCAAAAAC TTCATCTTCC
AGTTCCCATC ATCGAGATAG CTTTAAGGAT TTTTGTAATA AGAGTTCAGC TAATGTTTCA
GCTTCGTTAT CTTCTGCAGG TATAAAGCAT GATACCCATA GCACTTCCCA TACTAGTGAT
AGTTTTAAGG ATTTTTGTGA TAAGAGTTCA GCTAATGTCT CAGCTATGTT ATCTTCTGCA
GGTATAAAGC ATGATACCCA TAGCACTTCC CATTCTAGCT TCTCCAGCCA TACTAGTTCA
TATTCTAGCA GCAGGGCATC TAACCAAGCT GCTAGTAGCA GTAATAGTGA AAGTAAGCCT
GCTGCTTCTA AGGAGTCATC CTCTTCAAGC AAAGAATCTA AAGCCCCCCA TCTTACCCTA
GAGAATGCAG CTACGGAGGT GAGAAAGCAC ATACAAGAGG CTAAAAATGA TGGTCCTAAA
GCTACGAGTG TATCAGCCAG CCAGCAACAA CAAGCAAAAG GGGAGCAACT ACTTAAACAG
CTACGTGAAA TCAAGCAACA ACAGGAACGG TCGTATAGCC AAACACAGAC CGCTTACATT
ACACCAGGTA ATTCTGAAAT AGGGAATAAG CTGTTGTTAG ACCAGCTAAC CAAAAAAGGT
CAAGAATTGT CTACTTTAAA AGAATTAGAG TCAGAGCTAA CACAAAGCTT AGAGCGCGAG
CGTCCAACTA GCCATTATGA GGAAACAAGA AAAGAATCAA TACTAGCTAG TGCTACAACT
ACACCAAAAG AGATTAAGGT AAAAGATAAA GGAAAAGAAA AGGATACAAG CTTGACACCT
GGTACTACCC AAGCAACAAA TAACCTTCAT AGTACAACCC TATCTTCGTC TGGGGACATT
TCTACTGCTA CAAGTACTAC TGAACCACTA CTCAGCACAC CCACTAAAGG TCCAGCAGTT
AAAGTTGAGA GTGGTACACG TAAGACAAAA ATACCCTACA ATGATAGAGC GGACAGTTTT
AGCTATGACC ACTACTCTTC AAGCACTAGC ACAAATACAC CTGCTGTATC AGCTACAGAG
CCTACTAACC CGGCTACATC TAGTACTACT TCCACTAGTA CTACTGATAA AAGTGAAGCA
GAAATTCATA ACCAGTGGAG TGATTTGTTA AAGGAAATAC AAGTCCAATT GGGACATTCC
AAAATACAAG GTTTAGCAGA CGCTCTATAT CTACAAAAAC AGGCTAGATT CTATATAGAA
AAATTAAAGT CGTATGAAAA ATATAAATGC ATTAGCAGAT CTTCGCTCGA GCAAGCACTC
AATGAGCTGG AAAAGCTATC TGTACAGGTT GAAGCTGCCC TGGATAAGGA GAGGTATAAT
GCAGTCGTAG GTGAAATCAA GCAAGTGTTG GATGCAAGAA TAGAAACTAT TAACAGGCTA
CAAGAGGAAG AAGCAGACTC AGCTATTATC ATAGCAACGG CACAAGAGAT AAGACCTCAT
GTAGAAGCAG CTATAAAACG ATTGGAAGAT TTCCCAACTA AACAATATAA GACACCTAGT
ATAGAGAACT TGAAAGAAGC TAAAAGACAA CTTGAAGGGG TGATTAGAGA TTATACTCAC
AGGAAAGTTT TATGGGATAA GTACAAGTCA GCTTTTAGCT ATGCAGCCAA GCATGTTTCA
AAAAGGATAG AGCAAGAGCA AGAAGAATTA GCTAAGAGCA TAGGAAAGTC AGTCGAAAAG
CCTGAAATAA CTATAACCAA TAAGTCAGGT ATAACCATAG CGCAACTAGA GGAAATTTTT
CCAGAAGACT CCAGCAATAA CTTCAATTTG CAAAAACTGA TAGATACTTT AGATATAACT
GTTAATTTCC CAGCAGCAGA AGAGAATGCT AACAGTAGCG AGGAGGATGA AGAAGAAGAA
AGGCAAGGTG TAGAGGAGCA TTTAGAAAGA GAAGCTAAGT ACGAGAAAAC AGTAAGCCAA
AAGGAAGAAC AAGAAAGGGC TAGTAGCCAA GCAGGTATAA ATGAGAAAGA GAAAGAATCA
GCAGCAAAAA GGCAAGCCAG AAAAGAACAA AGAAGAGCTA ACCAAAAAGC CAGAAGAAAA
GAAGCATCTC CCAAAAAAGC CCATGAAAAA GAGCTGATAA AAATAGGACA AGCTAAAGAG
CAACTTAAAA GCTTGGTTAA AGATCAAGTG AAATCTTGTG TAGAGGATGC TGAATTTACT
AATTGTAGAG TAGTATTATT GATGATCGAT GAGAAGCTCA AAAAAGAACC CAATAATAAG
TCTTTACAAG CGTTAAGGGT AAAACAGCTA GAGAAATTCC AAAGCCACCC GCTTTATCAG
CAAGCTGTAG AGTTAGGCAT AGAAGCAGCT GCATTGAGAA GAGAAGCGGA GGAAAGCGGC
ACAGATGAAT TGATAGAAAG TGCAGAATTA GACTATAAAA TATTAGCCGG TATAGGCAAG
TCACGTGAAT TTCGGAAAGA AGCAGAAGAG ATTAGAGATA ATATCATTAA CCCTTTACGG
GATCTACTAG GCTGCCCACA TACATCAAAA GGATTAAGAA GGGCAGCAGA AGGTTTAAAA
GGTTTTGGGG AAAGCTTTTA TGATACTGGA AAAGCGTTTA CAGTAGATAT GCCTATACTG
TTGGGTAAAT TGGGGGTGAG GGGAGTAGAA TCATTGGTGA AGTGGGAAGA TAAGTTAGGA
GTCAAAGAAG GCTGGGCTAA CCTAGGAAAA GCTTGTAAAT GCATATTTGA TCAGACAAAG
CAAGACTGGG AAGATCCAGC AGCTTATAAA GCTCGTATGC AGGCTGTCCA AGAAGTAAAA
AGTAGGCACG ACTTTTTCTG CCGAGCATTT GATGCAGAGA ATTATCATTT AGGCCAAGAT
AAGGCATTGG GATATATGAC AGCAGAGATA GTGCAAGCAC TCTTTGGTGG AGAGATTATC
AAAGGAACCA CTAAAGGTGC TACCAAGGGT GTTGAGTTTA TTAAGAAAAT CCAGCAAGGC
GCTAAAGTAG AGAAGGCGGT AGTAGAAGGG GTGAAAGGAG CAGTTAATAT TGATTTAATG
AATAAAGGGA AACAATTTAA AACAGCACAT GAGATTGCTA GAGAAGGAGG TAAGCATGCT
GGTATGTATA GAAGCAGTAT ACAATTGCCT GACAAGCAGC TAGAAAAAGC CCTTAAGTCT
CTTGAAAAGA GTATAGAAAA GCATAAAAAC TTAATAAAAG ACCCAGCAAG ATATCTAAAA
GAATATGGAA AAGACTTAGA AGGGCCTTGG GATATGTTAA GAGCTGAAAG AAGGCAAGCT
TTGATAGAAA AAATTTGGCC GAAAGAGATA AAGAACTTCA AAGAGCAAAG GGAAATTATT
AAAGGCATTT TAAATAGTAG GAAATGA
 
Protein sequence
MYSTSKRIIA FILLSSQLLT LTSCGDNFNI PIEQQIAHGH KKADKEPSKV GALVPLVNGL 
ERYVAETKDK RESTLSQSLT NQLPLVESNS ASATEGKALF VGRSKTLKKN KEQKSVSSQA
KTFTTPVYID RPTGYSRKLT HDKAIGDKHF TTLNKSKDLD SYREQARASQ KQVSELSDIA
LNVTVAELLT IDQGLIAKGG HQVYLTVVEG KWMAIVKENA PIGFSRTQYL DLYLAPGFTT
NQLSKHSPEW QEAHIGVVFP EKSSTGKGYV YIGDGGLLGG GNSGSKGGGG NDSDRTSSRS
ESSERSTSGS SHSSSSSSGR ASHNIGSSHS SFSMPKTSSS SSHHRDSFKD FCNKSSANVS
ASLSSAGIKH DTHSTSHTSD SFKDFCDKSS ANVSAMLSSA GIKHDTHSTS HSSFSSHTSS
YSSSRASNQA ASSSNSESKP AASKESSSSS KESKAPHLTL ENAATEVRKH IQEAKNDGPK
ATSVSASQQQ QAKGEQLLKQ LREIKQQQER SYSQTQTAYI TPGNSEIGNK LLLDQLTKKG
QELSTLKELE SELTQSLERE RPTSHYEETR KESILASATT TPKEIKVKDK GKEKDTSLTP
GTTQATNNLH STTLSSSGDI STATSTTEPL LSTPTKGPAV KVESGTRKTK IPYNDRADSF
SYDHYSSSTS TNTPAVSATE PTNPATSSTT STSTTDKSEA EIHNQWSDLL KEIQVQLGHS
KIQGLADALY LQKQARFYIE KLKSYEKYKC ISRSSLEQAL NELEKLSVQV EAALDKERYN
AVVGEIKQVL DARIETINRL QEEEADSAII IATAQEIRPH VEAAIKRLED FPTKQYKTPS
IENLKEAKRQ LEGVIRDYTH RKVLWDKYKS AFSYAAKHVS KRIEQEQEEL AKSIGKSVEK
PEITITNKSG ITIAQLEEIF PEDSSNNFNL QKLIDTLDIT VNFPAAEENA NSSEEDEEEE
RQGVEEHLER EAKYEKTVSQ KEEQERASSQ AGINEKEKES AAKRQARKEQ RRANQKARRK
EASPKKAHEK ELIKIGQAKE QLKSLVKDQV KSCVEDAEFT NCRVVLLMID EKLKKEPNNK
SLQALRVKQL EKFQSHPLYQ QAVELGIEAA ALRREAEESG TDELIESAEL DYKILAGIGK
SREFRKEAEE IRDNIINPLR DLLGCPHTSK GLRRAAEGLK GFGESFYDTG KAFTVDMPIL
LGKLGVRGVE SLVKWEDKLG VKEGWANLGK ACKCIFDQTK QDWEDPAAYK ARMQAVQEVK
SRHDFFCRAF DAENYHLGQD KALGYMTAEI VQALFGGEII KGTTKGATKG VEFIKKIQQG
AKVEKAVVEG VKGAVNIDLM NKGKQFKTAH EIAREGGKHA GMYRSSIQLP DKQLEKALKS
LEKSIEKHKN LIKDPARYLK EYGKDLEGPW DMLRAERRQA LIEKIWPKEI KNFKEQREII
KGILNSRK