| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0460 |
|---|
| Symbol | |
|---|
| ID | 6377409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 554953 |
|---|
| End bp | 557862 |
|---|
| Gene Length | 2910 bp |
|---|
| Protein Length | 969 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642681620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957599 |
|---|
| Protein GI | 189501882 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3857] ATP-dependent nuclease, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATA GCTATCATTC CTTTTTAGAG GAGGTTACCG AAGATTTATT TCAGCAATAT
ACAGTAGCAG ATATAACTCG ATCTATATTT ATATTGCCTG GCCAAAAAGC AGTGGAGAGG
TTTCAACAAG TTTTGTGCAA TAAAATAGAT AACCCTGCTT GGCTACCTCA AGTGCTAACT
TTAGAACCAT GGATAGAACA ATGCAGTAAA ATTACTATTG CTCCTAATTT AGATCTTCTT
GTATTACTTT ATCAGACCTT CCAACAATTT AAGGCTGCTG ATGAGCCTTT TGAGCGTTTT
TATGGATGGG GTAATATGCT GCTGCAAGAT TTTGATATAT TAGATAAGTG TTTGGTTGAC
CCTAATCAAC TATTTGCCAA TCTATATGAA CAAAAAGCTA TAACACTTAC TTACGAGCAT
CTTTCTGAAG CACAAAAAGA AGCCATTCAA TCTTTTTGGA AATCTTTTGA AAAACGGCTG
TCTACGCAAC AGCAGGATTT CCTGAAATTA TGGGAAATAT TACCACATAT TTATAAAAGG
TTTACAGCTG AGTTAATAAA AAAAGGTATA GGATATGCAG GGCTTTGCTA TAGAGAGCTA
TACAATAACC TAACAAAAGA GCTACTTATT AACTATAAGC ATTTCTTTTT TATAGGCTTC
AATGCCTTAC ATCCTGTAGA AGAGAAAATT TTTGCTTGGT TGCACAGTAA TATCTCTACC
CAATTTTACT GGGATACAGA TGCTTATTAT ATGAATGATA AAAACCAAGA AGCAGGATAT
TATTTAAGAC ATCATCAAAC AAAACCCTAT TTTCAAACAA GCTTTAAAAA GCCTTTTCCG
GCTAGAATAC AAAATAATTT TAAAAAGATA AACTTTTTTG AAGCCAATAC TGCAGCAGAG
CAAGTCGAGT TAGTAAGCAG CCAGCTACAG CAATTAATAA ACCAAGAAGG AAATAGCTTT
CAACCACACC AAGCAGTAAT TGTTTTAGCG AACGAAGATT TATTTCTTCC TATGCTGCAT
GCACTACCAA CTAATTTACA ATCCGTTAAT ACTACGCTAG GTTATCCTAT TACATATACA
GCTAGTTATC AGCTTATTGA GCAGATACTA GCTTTGCAAA TTACCACACA GCAGCCAACT
TGTCCAGCTG GTTATTTTCC CACTCAGGCC ATTATAGCTT TACTGAAACA TACACCAATT
AAGTATTGCA ACCAAGCGCT AGCTAGCGAA ACTATTCAAT TATTAACCAA TCATTATACA
AGTTATACAT CACAAAAAAT ATTATCAGAA GCTAGTGAAT TGTACCAAGC AATCTTTCGA
CCGGCATCTT CAACTATAGA TATTGCTCAG TATGTTATTG ATGTTATGAC GCTTGTAAAA
GCACAGTTAG AAGCTCAAGA AGATTCATCG CTCGCGTTAG AAGAAGAAGC ATTAGGTGAA
CTTATCAAAC AGTTAAGCTA TATACAAGTC ATAATAACAC CTCTGTATAA GGTATCTATA
GAGCGTTTTA TACAACTTTT CAGGCAGCTA ATACGTTCAC TTCAACTAAC TTTTAAAGAG
AAGACATCAG CAAAGGGTAT TCAAATATTA CGTATTTGGG AAACAGCTAA CTTAGACTTT
AAGTATGTTT TTATAGTGGG TATGAATGAA GGTAATTTGC CAGCTAGTAC TGCACAAGGC
TCCTTTATTC CTTATAACCT TAGAAAAGGA TACGGACTAC CCACCATGGA TATTTTTCAG
GCCACACTCG ATGCTTATTA TTTCTACCGG TTACTCCAAC GAGCTCAGCA AGTATATATT
ACTTATAATA CTCCTTCAAG TGCAACCAAT CCAAAAGAAG TGAGTCGTTA CCTATGGCAA
TTGCTATATG AAAGTAAGTT GCCAATAGAA CAGCATTATA TAAATACTGC TATCTATACA
CCCACTATTT GTCCTATTAT CATTAAAAAA GATGATGGTG TCCTATTAAA GTTAGAAGAG
TTTGTTGTTA AAAATGGACA AGAAAAACGT TCATTGACAC CAGCTGCACT CAACACCTAT
TTAGGTTGTA GCTTGAGGTT TTATTTTCGT TATATTCTTC AACTACAAGT ACCTCAACAA
TTGCTTATTG AAGATACAGA CGCCATACGA TTTGGTAGTT TGTTTCATAA GGTAATGGAA
AAATTATATG CCCCATTGCA AATAGCTCGC AAAGGTAGCA TGGTTCAAAA AAATGATTTA
GAAAAGCTAA AAAGTCAATT ACAGGCTATA ATAGCAGAAG TATTTTCTAA TGCTTTATAT
AGTAATCATA TACTACAGTG GGGAGGTGAG CACCTGATAG AACAAGAGGT AATGCAAAAA
GTAGTAAATA AGATATTAGA AATTGATAAA AAGCACACAC CTTTTACGTT GGTAGGGATA
GAAGTAGGAA AACAACAATC TTTAATGATT CACTTCAGGC TTACAAGCGA TAAAGTAGTT
GCTTTAAGTG GTATTATAGA TAGAATAGAC CAGAAACAAG ATTCCATTCG TGTTATAGAT
TATAAAACAG GTGGTGATGA AAAATATGTC GAACAAATTA GTAATTTATT TGATAGAAGC
ACTGCCCAAA AGACAAAAGT AATATTCCAA ACCTTTTTCT ATGCTTGGCT ATTTAAAAAG
CACGCTAACA ATAGTGCTTA TAAGATAATG CCTGGTATTG TTAATACTAG GTCTGCCTTT
AATACTAATT TTGATCCACG TCTCATGGTG AAACAAGTGG ATACTAAAGA TTATAGATAT
ATAGAAGATA TAACACCTTA TCAAAGCGAA TTTGAAACAG GCTTAGAATT GCTATTACAA
GAAATATTAG ACCCACAGAT ACCCTTTATA CAAACTGAAG ATCACTTTCA ATGTGCAACG
TGCCCTTATA AAAGAATATG TGAGCGTTAG
|
|---|
| Protein sequence | MDNSYHSFLE EVTEDLFQQY TVADITRSIF ILPGQKAVER FQQVLCNKID NPAWLPQVLT
LEPWIEQCSK ITIAPNLDLL VLLYQTFQQF KAADEPFERF YGWGNMLLQD FDILDKCLVD
PNQLFANLYE QKAITLTYEH LSEAQKEAIQ SFWKSFEKRL STQQQDFLKL WEILPHIYKR
FTAELIKKGI GYAGLCYREL YNNLTKELLI NYKHFFFIGF NALHPVEEKI FAWLHSNIST
QFYWDTDAYY MNDKNQEAGY YLRHHQTKPY FQTSFKKPFP ARIQNNFKKI NFFEANTAAE
QVELVSSQLQ QLINQEGNSF QPHQAVIVLA NEDLFLPMLH ALPTNLQSVN TTLGYPITYT
ASYQLIEQIL ALQITTQQPT CPAGYFPTQA IIALLKHTPI KYCNQALASE TIQLLTNHYT
SYTSQKILSE ASELYQAIFR PASSTIDIAQ YVIDVMTLVK AQLEAQEDSS LALEEEALGE
LIKQLSYIQV IITPLYKVSI ERFIQLFRQL IRSLQLTFKE KTSAKGIQIL RIWETANLDF
KYVFIVGMNE GNLPASTAQG SFIPYNLRKG YGLPTMDIFQ ATLDAYYFYR LLQRAQQVYI
TYNTPSSATN PKEVSRYLWQ LLYESKLPIE QHYINTAIYT PTICPIIIKK DDGVLLKLEE
FVVKNGQEKR SLTPAALNTY LGCSLRFYFR YILQLQVPQQ LLIEDTDAIR FGSLFHKVME
KLYAPLQIAR KGSMVQKNDL EKLKSQLQAI IAEVFSNALY SNHILQWGGE HLIEQEVMQK
VVNKILEIDK KHTPFTLVGI EVGKQQSLMI HFRLTSDKVV ALSGIIDRID QKQDSIRVID
YKTGGDEKYV EQISNLFDRS TAQKTKVIFQ TFFYAWLFKK HANNSAYKIM PGIVNTRSAF
NTNFDPRLMV KQVDTKDYRY IEDITPYQSE FETGLELLLQ EILDPQIPFI QTEDHFQCAT
CPYKRICER
|
|---|
| |