Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0454 |
Symbol | |
ID | 6377266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 542662 |
End bp | 545571 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642681614 |
Product | hypothetical protein |
Protein accession | YP_001957593 |
Protein GI | 189501876 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3857] ATP-dependent nuclease, subunit B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATA GCTATCATTC CTTTTTAGAG GAGGTTACCG AAGATTTATT TCAGCAATAT ACAGTAGCAG ATATAACTCG ATCTATATTT ATATTGCCTG GCCAAAAAGC AGTGGAGAGG TTTCAACAAG TTTTGTGCAA TAAAATAGAT AACCCTGCTT GGCTACCTCA AGTGCTAACT TTAGAACCAT GGATAGAACA ATGCAGTAAA ATTACTATTG CTCCTAATTT AGATCTTCTT GTATTACTTT ATCAGACCTT CCAACAATTT AAGGCTGCTG ATGAGCCTTT TGAGCGTTTT TATGGATGGG GTAATATGCT GCTGCAAGAT TTTGATATAT TAGATAAGTG TTTGGTTGAC CCTAATCAAC TATTTGCCAA TCTATATGAA CAAAAAGCTA TAACACTTAC TTACGAGCAT CTTTCTGAAG CACAAAAAGA AGCCATTCAA TCTTTTTGGA AATCTTTTGA AAAACGGCTG TCTACGCAAC AGCAGGATTT CCTGAAATTA TGGGAAATAT TACCACATAT TTATAAAAGG TTTACAGCTG AGTTAATAAA AAAAGGTATA GGATATGCAG GGCTTTGCTA TAGAGAGCTA TACAATAACC TAACAAAAGA GCTACTTATT AACTATAAGC ATTTCTTTTT TATAGGCTTC AATGCCTTAC ATCCTGTAGA AGAGAAAATT TTTGCTTGGT TGCACAGTAA TATCTCTACC CAATTTTACT GGGATACAGA TGCTTATTAT ATGAATGATA AAAACCAAGA AGCAGGATAT TATTTAAGAC ATCATCAAAC AAAACCCTAT TTTCAAACAA GCTTTAAAAA GCCTTTTCCG GCTAGAATAC AAAATAATTT TAAAAAGATA AACTTTTTTG AAGCCAATAC TGCAGCAGAG CAAGTCGAGT TAGTAAGCAG CCAGCTACAG CAATTAATAA ACCAAGAAGG AAATAGCTTT CAACCACACC AAGCAGTAAT TGTTTTAGCG AACGAAGATT TATTTCTTCC TATGCTGCAT GCACTACCAA CTAATTTACA ATCCGTTAAT ACTACGCTAG GTTATCCTAT TACATATACA GCTAGTTATC AGCTTATTGA GCAGATACTA GCTTTGCAAA TTACCACACA GCAGCCAACT TGTCCAGCTG GTTATTTTCC CACTCAGGCC ATTATAGCTT TACTGAAACA TACACCAATT AAGTATTGCA ACCAAGCGCT AGCTAGCGAA ACTATTCAAT TATTAACCAA TCATTATACA AGTTATACAT CACAAAAAAT ATTATCAGAA GCTAGTGAAT TGTACCAAGC AATCTTTCGA CCGGCATCTT CAACTATAGA TATTGCTCAG TATGTTATTG ATGTTATGAC GCTTGTAAAA GCACAGTTAG AAGCTCAAGA AGATTCATCG CTCGCGTTAG AAGAAGAAGC ATTAGGTGAA CTTATCAAAC AGTTAAGCTA TATACAAGTC ATAATAACAC CTCTGTATAA GGTATCTATA GAGCGTTTTA TACAACTTTT CAGGCAGCTA ATACGTTCAC TTCAACTAAC TTTTAAAGAG AAGACATCAG CAAAGGGTAT TCAAATATTA CGTATTTGGG AAACAGCTAA CTTAGACTTT AAGTATGTTT TTATAGTGGG TATGAATGAA GGTAATTTGC CAGCTAGTAC TGCACAAGGC TCCTTTATTC CTTATAACCT TAGAAAAGGA TACGGACTAC CCACCATGGA TATTTTTCAG GCCACACTCG ATGCTTATTA TTTCTACCGG TTACTCCAAC GAGCTCAGCA AGTATATATT ACTTATAATA CTCCTTCAAG TGCAACCAAT CCAAAAGAAG TGAGTCGTTA CCTATGGCAA TTGCTATATG AAAGTAAGTT GCCAATAGAA CAGCATTATA TAAATACTGC TATCTATACA CCCACTATTT GTCCTATTAT CATTAAAAAA GATGATGGTG TCCTATTAAA GTTAGAAGAG TTTGTTGTTA AAAATGGACA AGAAAAACGT TCATTGACAC CAGCTGCACT CAACACCTAT TTAGGTTGTA GCTTGAGGTT TTATTTTCGT TATATTCTTC AACTACAAGT ACCTCAACAA TTGCTTATTG AAGATACAGA CGCCATACGA TTTGGTAGTT TGTTTCATAA GGTAATGGAA AAATTATATG CCCCATTGCA AATAGCTCGC AAAGGTAGCA TGGTTCAAAA AAATGATTTA GAAAAGCTAA AAAGTCAATT ACAGGCTATA ATAGCAGAAG TATTTTCTAA TGCTTTATAT AGTAATCATA TACTACAGTG GGGAGGTGAG CACCTGATAG AACAAGAGGT AATGCAAAAA GTAGTAAATA AGATATTAGA AATTGATAAA AAGCACACAC CTTTTACGTT GGTAGGGATA GAAGTAGGAA AACAACAATC TTTAATGATT CACTTCAGGC TTACAAGCGA TAAAGTAGTT GCTTTAAGTG GTATTATAGA TAGAATAGAC CAGAAACAAG ATTCCATTCG TGTTATAGAT TATAAAACAG GTGGTGATGA AAAATATGTC GAACAAATTA GTAATTTATT TGATAGAAGC ACTGCCCAAA AGACAAAAGT AATATTCCAA ACCTTTTTCT ATGCTTGGCT ATTTAAAAAG CACGCTAACA ATAGTGCTTA TAAGATAATG CCTGGTATTG TTAATACTAG GTCTGCCTTT AATACTAATT TTGATCCACG TCTCATGGTG AAACAAGTGG ATACTAAAGA TTATAGATAT ATAGAAGATA TAACACCTTA TCAAAGCGAA TTTGAAACAG GCTTAGAATT GCTATTACAA GAAATATTAG ACCCACAGAT ACCCTTTATA CAAACTGAAG ATCACTTTCA ATGTGCAACG TGCCCTTATA AAAGAATATG TGAGCGTTAG
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Protein sequence | MDNSYHSFLE EVTEDLFQQY TVADITRSIF ILPGQKAVER FQQVLCNKID NPAWLPQVLT LEPWIEQCSK ITIAPNLDLL VLLYQTFQQF KAADEPFERF YGWGNMLLQD FDILDKCLVD PNQLFANLYE QKAITLTYEH LSEAQKEAIQ SFWKSFEKRL STQQQDFLKL WEILPHIYKR FTAELIKKGI GYAGLCYREL YNNLTKELLI NYKHFFFIGF NALHPVEEKI FAWLHSNIST QFYWDTDAYY MNDKNQEAGY YLRHHQTKPY FQTSFKKPFP ARIQNNFKKI NFFEANTAAE QVELVSSQLQ QLINQEGNSF QPHQAVIVLA NEDLFLPMLH ALPTNLQSVN TTLGYPITYT ASYQLIEQIL ALQITTQQPT CPAGYFPTQA IIALLKHTPI KYCNQALASE TIQLLTNHYT SYTSQKILSE ASELYQAIFR PASSTIDIAQ YVIDVMTLVK AQLEAQEDSS LALEEEALGE LIKQLSYIQV IITPLYKVSI ERFIQLFRQL IRSLQLTFKE KTSAKGIQIL RIWETANLDF KYVFIVGMNE GNLPASTAQG SFIPYNLRKG YGLPTMDIFQ ATLDAYYFYR LLQRAQQVYI TYNTPSSATN PKEVSRYLWQ LLYESKLPIE QHYINTAIYT PTICPIIIKK DDGVLLKLEE FVVKNGQEKR SLTPAALNTY LGCSLRFYFR YILQLQVPQQ LLIEDTDAIR FGSLFHKVME KLYAPLQIAR KGSMVQKNDL EKLKSQLQAI IAEVFSNALY SNHILQWGGE HLIEQEVMQK VVNKILEIDK KHTPFTLVGI EVGKQQSLMI HFRLTSDKVV ALSGIIDRID QKQDSIRVID YKTGGDEKYV EQISNLFDRS TAQKTKVIFQ TFFYAWLFKK HANNSAYKIM PGIVNTRSAF NTNFDPRLMV KQVDTKDYRY IEDITPYQSE FETGLELLLQ EILDPQIPFI QTEDHFQCAT CPYKRICER
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