Gene Aasi_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0400 
Symbol 
ID6377331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand+ 
Start bp470676 
End bp471338 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content40% 
IMG OID642681565 
Producthypothetical protein 
Protein accessionYP_001957547 
Protein GI189501830 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA ACATAGCTCC TTCATGGAAA CCATACTTAG AAGAAGAATT TAACAAGCCC 
TATTTCGAGC AGCTGGCAGC TTTTGTAAAA GCAGAATACA AATCTAATAC TATCTACCCA 
CCTGCCAAGC AAATATTTAA TGCATTTGAG CTATGTAGCT TTGATAATAC TAAGGTTGTT 
ATCTTAGGTC AAGATCCTTA CCATGGGTTC AAGCAGGCAA ATGGACTAAG TTTTTCTGTA 
GGCAAAGAAG TTCGCATGCC GCCTTCTTTA GTCAATATTT TTAAAGAGAT CGAGAGTGAC 
TTAGGACATC CTGTGCCAAC CAATGGTGAT TTGACGCGGT GGGCGCAGCA AGGTGTATTG 
TTACTAAATG CCACCTTAAC GGTACGAGAA AAGCAGCCAG GTTCTCATCA AAACAAAGGA 
TGGGAAACCT TTACTGATAC AATTATTTCT ATCTTGTCAC AACATAAGCA ACATTTAGTG 
TTTATGCTAT GGGGAAACTA CGCACAAAAA AAGGAAGTGC TGATTGATAC TAGTAAGCAT 
TTAGTATTAA AATCTGCCCA CCCATCGCCT TATGCTGCAG ATCGAGGCTT TTTTGGCAAT 
AAGCATTTTA GCAAGGCAAA TGCATATCTA GTTGAGCATG GCCTAACACC CATCAACTGG 
TAA
 
Protein sequence
MQVNIAPSWK PYLEEEFNKP YFEQLAAFVK AEYKSNTIYP PAKQIFNAFE LCSFDNTKVV 
ILGQDPYHGF KQANGLSFSV GKEVRMPPSL VNIFKEIESD LGHPVPTNGD LTRWAQQGVL 
LLNATLTVRE KQPGSHQNKG WETFTDTIIS ILSQHKQHLV FMLWGNYAQK KEVLIDTSKH 
LVLKSAHPSP YAADRGFFGN KHFSKANAYL VEHGLTPINW