| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0318 |
|---|
| Symbol | |
|---|
| ID | 6377717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 366246 |
|---|
| End bp | 367772 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642681496 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957481 |
|---|
| Protein GI | 189501764 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA CATATTCTTT AATACAGCCA TCCATAATTC GCTTTTTATT GATAAGTGCT
GTTTTACAGA GTTGCGGCAC CCCTCCTAAT TCACCGCCTC CTGCTAAAGA AGAACCCATA
ACTCACCTCC CCATTCCCAT CGAAGGGCTA GCAGATAAAC AGTTATCCCC TAAAGAAAGT
CCTATAAGTA CTATACCCCA GCTACAAGCA ACAGAAATCG AGGAAGGAGG GGCGATCCAA
GACATGCAAG CGTTGTCGGA TTTGGCAGTA GCCCAAGGAT CCGGACAAGA CAAAGCTTGT
AAAACAGTAA AAGCCTATTA CCACAAGGTA GAAGCGGGAG TACAAGAGAT TGCTCTTTCC
ACTTATGCAA TGGCCCGATT ATATGAGCGA GGTAAGGACA CAGAAGAAGA TTTAGGATTA
GCCTTAGCGC TTTACACTAA AGCTAGCAAA TTAGGACATC CAAAAGCAGC CTACCATGCA
GGACGACTTC ACTTGTTTGG CAGAACAGCA AGAAGTGATA TAAGAGAAGC ATACGGATTT
CTAGAAAAAG CAGGCCAAGT AGGAATCTAT AAAGCATGTT TATTATTGGG CAGAGTACAT
GAATATGGTT GGGGTACTGT GCCCAATGCA ACAGAAGCAT TAGCGTGGTA TGCACAAGCA
TCATTATCCT TAAATAGGGA TAGCTATTCA CGTGGTAGTG CGTTGTACCA TTTAGGATGG
TTGTATAAGC TAGGTAAAGG GGTTGAAAGT AATGAAGCAG CAGCATTATC TTTTTTTGAG
CAGGCTCTGA TAATAGGGCA GGGTAACCCT ATTAATCAAA CACCTGACCA AACAAGTAGA
ATGTACAGTC AACGGATAGA AAATAGGGTA AAAAAGCAAA CTCAAGAACA GCTCATACGA
ATCCTTACAG AAATATCCCA TAATGGAGAA GCTATTATAA AAGAATTGGA AAATGTAAAT
GCTCATTTGG AGCTTGATGA CAAGGCTGAT TTAGCACTGT TAGTACATCA CCCACTTTTT
AAAACAAATT GCAAAAGCGT TCGTTTATTA AACCAGATGG GAAATGTTGG ATTAATAGTT
GAATTTGTTA AACATTTAAA AGGGACCAAT GTCGATGCGA TTAATTTGAG AGAAACTGAA
ATGTGTGACG CAGAAGTAGT AGAATTTTCC AAGTATTTAC AAAGGACCAA TGTGCGTACC
CTTAATTTGG GAGAGAATAA AATAACAAGT ACAGGAGCTA TAGAGATCGC CAAGCATTTA
CAAAGAACAC AGGTGCATAC GCTTGATTTA GGTTGGAATA AAATAGGTGA TCAAGGTTTG
GTGGAGGTTG CTGAAAACTT GCAAGGAACA AATGTACATA CAATTTCTTT AGCTAAGAAT
GATATAGGAG ACGAAGTTAC AATCAACTTT GCTAGCCATT TACAGGGAAC ACAGGTGCAT
ACGGTTGATT TAAGCGAGAA TCTAATAACG CCTGATGTCC AAAGGTTACT CGTGGAACAA
TATCCGCATA TTAAGTGGTT TTTTTAG
|
|---|
| Protein sequence | MKYTYSLIQP SIIRFLLISA VLQSCGTPPN SPPPAKEEPI THLPIPIEGL ADKQLSPKES
PISTIPQLQA TEIEEGGAIQ DMQALSDLAV AQGSGQDKAC KTVKAYYHKV EAGVQEIALS
TYAMARLYER GKDTEEDLGL ALALYTKASK LGHPKAAYHA GRLHLFGRTA RSDIREAYGF
LEKAGQVGIY KACLLLGRVH EYGWGTVPNA TEALAWYAQA SLSLNRDSYS RGSALYHLGW
LYKLGKGVES NEAAALSFFE QALIIGQGNP INQTPDQTSR MYSQRIENRV KKQTQEQLIR
ILTEISHNGE AIIKELENVN AHLELDDKAD LALLVHHPLF KTNCKSVRLL NQMGNVGLIV
EFVKHLKGTN VDAINLRETE MCDAEVVEFS KYLQRTNVRT LNLGENKITS TGAIEIAKHL
QRTQVHTLDL GWNKIGDQGL VEVAENLQGT NVHTISLAKN DIGDEVTINF ASHLQGTQVH
TVDLSENLIT PDVQRLLVEQ YPHIKWFF
|
|---|
| |