| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0239 |
|---|
| Symbol | |
|---|
| ID | 6376315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 269259 |
|---|
| End bp | 269960 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642681426 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957411 |
|---|
| Protein GI | 189501694 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.661071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATAA CACAACGTAC TATGCCTGAC ATGGCTCTGT CAGAAAAGAT ATTCATGATA
TTAGCTAGCA TTTTTATAAC CTCGCTTATG CTTACCAATG TTATTGCAGG TAAGTATTTT
AAATTTTTTG GATTGCCTTT ATCTTGTAGT ACTTTAGTAT ATCCATTCAC CTTTGTAGTA
ACAGATATTG TTTCAGAAGT ATATGGCCTA CATCGTGCTA GGCTACTTGT ATTAGCTGGC
TTTATAGTAA GTATTGTAGT TACTATGCTA GTATGGATAG CTAATCAACT GCCTATTGCT
CCAACATCGC CTATAGATGC TGCTGCATTT AGCCAACTAT TTGGGCTTTT CCCTGGTGTT
GTATTAGGAT CTATGATTGG TTATTTAACG GCTCAATTTA TAGATGTACA AATCTTTGAG
TACTTAAGAA TTATTACTAA AAACAAACAT CTTTGGGTTA GAAATAACTT TTCTACACTA
GCTAGTCAGC TAGTTGATAC GATTATTGTA GTAACAATTG CTTGGGTCAT ATGGCCTATA
ATTGATGGTA ATACAGCCAC ACAACCTATT GGATGGCAGG TATGGAGTAA AATTGTAATG
GGCCAATATC TTTTTAAGGG CTTACTAGCA CTATTAGATA CACCATTTGT TTATGTTAGC
ACTTACTTGA TTGAAAAGTG GATTGGTATA CAGCGTAGTT AA
|
|---|
| Protein sequence | MIITQRTMPD MALSEKIFMI LASIFITSLM LTNVIAGKYF KFFGLPLSCS TLVYPFTFVV
TDIVSEVYGL HRARLLVLAG FIVSIVVTML VWIANQLPIA PTSPIDAAAF SQLFGLFPGV
VLGSMIGYLT AQFIDVQIFE YLRIITKNKH LWVRNNFSTL ASQLVDTIIV VTIAWVIWPI
IDGNTATQPI GWQVWSKIVM GQYLFKGLLA LLDTPFVYVS TYLIEKWIGI QRS
|
|---|
| |