Gene Aasi_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0223 
Symbol 
ID6376422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp247424 
End bp248749 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content36% 
IMG OID642681411 
Producthypothetical protein 
Protein accessionYP_001957396 
Protein GI189501679 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.180201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TAGCTTTTTA TACATTAGGG TGCAAACTAA ATTTTTCAGA AACTTCTGCT 
GTTGGCCGAT TGTTTACAGA ACAAGGGTAC CAAAAGGTAG AATTTGAAGA TAACCCTCAC
ATTTTTATAA TCAATACGTG TTCTGTAACG GAGCAGGCAG ATAAGAAATG TAGACGCATA
GTTAAAGATG CTCTTAAAAT CTCTCCTGAA GCCTTTATTA TTATTATGGG TTGCTATGCG
CAGCTTAAGC CAGAAGAAAT TGCTAGCATT CCAGGTGTGG ATGTTGTTTT AGGTGCACAT
GAGAAATTTA AGTTATTAGA GATAATCAGC AGCTTCGACA AAAAAGGACA AGCAGAAGTA
TATGTCTCCT GTATAAAAGA TGTTAACACT TTCACGCATG CTCACTCTAT AGGAGATAGA
ACACGTACTT TTTTAAAAGT ACAAGATGGC TGTAACTACC ATTGTTCTTT TTGTACCATT
CCATTAGCAA GAGGAAAAAG TAGAAGCGAT ACCATAGAAA GCATTGTAGA ACAAGCAAGA
AAAATTGCTG ATCAAGGAAT AAAAGAAATA GTTTTGACAG GAGTTAATAT TGGTGACTAT
GGCATTATTG ACAATCGACG TCAAACCAAC TTCTTATCAT TAATAGAAGC ACTTGAAAAA
GTAGTTGATA TTAAACGTTT CCGTATATCT TCTATTGAAC CCAATTTACT AACCGACGAA
ATTATTCAGT TCGTGGCACA GTCTGGTAGG TTTGTGCCTC ACTTTCATAT CCCTTTACAA
TCTGGGAATA ATGATATTCT TAAGCTTATG CGGCGGCGCT ATCAGCGAGA ATTATACGTA
GAACGGGTAG CACATATTAA AAAGCTAATG CCACACTGTT GTATAGGCGT AGATGTGATT
GTAGGTTTTC CAGGAGAAAC CGAAGAGAAA TTTTTAGATA CTTATCAGTT CCTAAATGAG
TTAGATATCT CATATTTACA TGTATTTCCT TATTCAGAAA GACAAAATAC ACAAGCTATT
ACATTAGAAG GGATAGTTTC ACAAAAAGAA AGAAACAGAA GAGCCAGTAT GCTCCGTATC
CTTTCTGACA AAAAACAACG CTACTTTTAT GAGCAGAACC TAGGAAAGAC TGTAGAAATA
CTATTTGAAC AACCCGATGT AAATGGCACC ATACAAGGAT TTTCTGATAA CTATGTACGT
GTCAGTGTAC CTTATGACGC TAATTTGGTA AATACTTTAC ATCAGGTACA GCTTAAAAAG
TTGAAAGCTG ATGGATTAGT AGAGGGAAAT ATCATGCCAC TACATCAGAA TAGTCTTATA
GCTTAG
 
Protein sequence
MKRVAFYTLG CKLNFSETSA VGRLFTEQGY QKVEFEDNPH IFIINTCSVT EQADKKCRRI 
VKDALKISPE AFIIIMGCYA QLKPEEIASI PGVDVVLGAH EKFKLLEIIS SFDKKGQAEV
YVSCIKDVNT FTHAHSIGDR TRTFLKVQDG CNYHCSFCTI PLARGKSRSD TIESIVEQAR
KIADQGIKEI VLTGVNIGDY GIIDNRRQTN FLSLIEALEK VVDIKRFRIS SIEPNLLTDE
IIQFVAQSGR FVPHFHIPLQ SGNNDILKLM RRRYQRELYV ERVAHIKKLM PHCCIGVDVI
VGFPGETEEK FLDTYQFLNE LDISYLHVFP YSERQNTQAI TLEGIVSQKE RNRRASMLRI
LSDKKQRYFY EQNLGKTVEI LFEQPDVNGT IQGFSDNYVR VSVPYDANLV NTLHQVQLKK
LKADGLVEGN IMPLHQNSLI A