| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0185 |
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| Symbol | rplE |
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| ID | 6376499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 204306 |
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| End bp | 204851 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642681374 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001957359 |
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| Protein GI | 189501642 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.2944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAGCC CAAGACTACA ACACAAATAC TTTCAAGAAG TAGTTCCTGC ACTTAAAAAT
GAGATGAACT ATACATCAGT TATGCAGGTA CCACGTATAG AAAAAATATG CCTTAACCAA
GGCGTAGGAG CTGCTGTCCA AGATAAAAAA TTGATTGAGA TAGCAGTAGA CGAATTAACA
ACTATTGCAG GACAAAAAGC AGTACCTACA GTAGCTAGAA AAGCTATATC TAACTTTAAA
TTAAGAGAAG GTATGCCTAT CGGTGCTACA GTTACGCTGC GTGGTAGAAA AATGTATGAG
TTTTTAGATC GTCTTATAAC AATTGCATTG CCACGTGTAC GTGACTTTAG AGGCGTTAAT
GATAAAAGCT TTGATGGAAG AGGCAATTAC ACCTTAGGAA TTAAAGAGCA AATTATTTTT
CCTGAAATTA GTATCGATAA AATAACTAAA TTAACAGGGA TGAGTATTAC CTTTGTGACT
AATACAGAGA GCGATAAAGA AGCACACACA TTGCTGAAGG CATTAGGTAT GCCTTTTAAA
AGTTAA
|
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| Protein sequence | MASPRLQHKY FQEVVPALKN EMNYTSVMQV PRIEKICLNQ GVGAAVQDKK LIEIAVDELT
TIAGQKAVPT VARKAISNFK LREGMPIGAT VTLRGRKMYE FLDRLITIAL PRVRDFRGVN
DKSFDGRGNY TLGIKEQIIF PEISIDKITK LTGMSITFVT NTESDKEAHT LLKALGMPFK
S
|
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