Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0185 |
Symbol | rplE |
ID | 6376499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 204306 |
End bp | 204851 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642681374 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001957359 |
Protein GI | 189501642 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.2944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAGCC CAAGACTACA ACACAAATAC TTTCAAGAAG TAGTTCCTGC ACTTAAAAAT GAGATGAACT ATACATCAGT TATGCAGGTA CCACGTATAG AAAAAATATG CCTTAACCAA GGCGTAGGAG CTGCTGTCCA AGATAAAAAA TTGATTGAGA TAGCAGTAGA CGAATTAACA ACTATTGCAG GACAAAAAGC AGTACCTACA GTAGCTAGAA AAGCTATATC TAACTTTAAA TTAAGAGAAG GTATGCCTAT CGGTGCTACA GTTACGCTGC GTGGTAGAAA AATGTATGAG TTTTTAGATC GTCTTATAAC AATTGCATTG CCACGTGTAC GTGACTTTAG AGGCGTTAAT GATAAAAGCT TTGATGGAAG AGGCAATTAC ACCTTAGGAA TTAAAGAGCA AATTATTTTT CCTGAAATTA GTATCGATAA AATAACTAAA TTAACAGGGA TGAGTATTAC CTTTGTGACT AATACAGAGA GCGATAAAGA AGCACACACA TTGCTGAAGG CATTAGGTAT GCCTTTTAAA AGTTAA
|
Protein sequence | MASPRLQHKY FQEVVPALKN EMNYTSVMQV PRIEKICLNQ GVGAAVQDKK LIEIAVDELT TIAGQKAVPT VARKAISNFK LREGMPIGAT VTLRGRKMYE FLDRLITIAL PRVRDFRGVN DKSFDGRGNY TLGIKEQIIF PEISIDKITK LTGMSITFVT NTESDKEAHT LLKALGMPFK S
|
| |