Gene Aasi_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0179 
Symbol 
ID6376707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp201858 
End bp202040 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content33% 
IMG OID642681368 
Product50S ribosomal protein L30 
Protein accessionYP_001957353 
Protein GI189501636 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.18169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG TTAGAATTAC CCAAGTAAGA AGCACTATTA AATGTCCTAT GAGGCAAAAG 
CTAACTATTA AAGCTTTAAA ACTTGGTAGG ATCAATAAGA GTGTAGAACT AGAATTTACA
CCACAAATTC AAGGAATGGT ACGACAAGTG CATCACTTAG TTACTACAGA AAATATAGCA
TAG
 
Protein sequence
MAKVRITQVR STIKCPMRQK LTIKALKLGR INKSVELEFT PQIQGMVRQV HHLVTTENIA