Gene Aasi_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0114 
Symbol 
ID6377726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp132818 
End bp134587 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content38% 
IMG OID642681306 
Productthiamine pyrophosphate protein domain-containing protein 
Protein accessionYP_001957291 
Protein GI189501574 
COG category[H] Coenzyme transport and metabolism
[E] Amino acid transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGG AGAAGCTCAT ATTAGCTGAT GCACTCACTT TATTTTTAAA AGACCTAAAT 
ACTAAATTTA TATTTGGTGT AAGCGGAGCT AATATTGAAC ACCTGCATGA TTCGATTTAT
AGATTAGGGG ATAACAAACT ATCAGCAATT TTAGCAAAGA GTGAATTTTC AGCCTCCTTT
ATGGCTGATG GATATGCACG TACCCACAAT ACCTTGGGCG TATGTTGTTC GACATCAGGA
GGAGCTATGG TCAACCTTGC CGTTGGTATA GCCGAGTCTT ATGCAGATAA TGTGCCCGTG
TTAGCAATAA TTGGTCAATC ACCCACCTTT CTTGAAGGAA AGGGTGCTTT TCAGGATTGC
TCAGGAAAAA CAAATACCCT AGATGGGTTA TCCTTTTGGC AATCTATTAC AAAATATGCA
GTTAAGATCA CTCGGCCTGA ACAATTTTGG GATAGTGTTG AACAAGCATT AAAAAGTGCT
TTTCATAAAA TTCCAGGGCC TACTGCATTA CTGATCCCTC GCGATTTATT TGAAGCTGAA
GTACACCAGC GCCCTAACCA CCTTTCTACG AATTTAATTG ATTATCGTGC TATCCATCCT
CATAAATCAT CTTCAATCCT AGCACTAAGA AAGTTATTAC AGCAGGCACA AAAGCCATTG
ATGATAGTTG GCAAGTATGC AAAGTACTAT CAAGCTGCTG AGAGAATTAA AAATTTTGCT
CATACTTTTA ATTGTATGGT GGTTACTACT TTAGCAGACG TTAATGCATT TGCTCATAAT
CACCCTCTTT ATTTAGGAAT GGTAGGTATT TGTGGACATC TTAAAGCACA TGATTTTATA
AAGGATGATG CTGATTTGAT TATTGTAGTT GAAGATGATT GTTCGGTCAT GACCACCACA
GGTGTTATGA GTAGCTTAAA TAATACTCCA TTAGTTTATC TCGGTACTGA TTCAACCAAA
GCATGTGCTG CAGTACAAGT TGATTTAGCC ATAGAAGGCG ATATACAACT TATTTTGGAC
CAAGTACTAG CTGACTATAG CGGGCCTGCC TTAGCCAAGT ACGTACAGGT GAGCACTCCA
ATGGAAAACC ACATCCAAGC TAATTCCCAC CTTCTTACTG ATAAACAGCA TGGCAATGCA
GGCTTGTCGG TCAGTAATGC TATAGAGAGT CTAGCAAAGT TTCTACCTAA TGTGAATCAG
GTCTTGTTTG ATGCTGGCAA TTGTGTGGCA GCGACCTCCC ATTTTCTAAA TTTTCCAGCA
CATATAAAAA CTGTCATTGC ACTAGGTATG GGAGGAATGG GGTATGCTAT TCCGGCAGCC
ATAGGCGCTC AATTAGGAAA CAATGCCGCT CAAAAAAGTA TGGTATTTAC AGGAGATGGA
GGGTTTCTGA TCACTGGACT AGAAATACAA ACAGCTGTAG AATACAATTT ACCTGTCTTA
TTTATAATCT TCAATAATAA TATGCATGGC ATGTGTGTTA CCCGCCAACA ATTATACTTT
GATAAGCGTA TAACTGCTTC AAGCTATGGT AAAATTCATA TTGCTGATTT AGTAAAAGGG
CTTGGTAGTC AAGAGAATCT TTGGTCTAGC TGTGTGGAGG ATATTCTAAG TTTGGAAAGT
AGCTTACACG ATTATTATAC CCATCATAGT TGTAAGACAG GAGTATTAGA AATAAAAGTA
ACAATCGAAG AACTACCTCC TTTTATCCCT TTTCTAGTGG CAAAAGGAGA GATGCAAGTA
GACAATAATA AAATGTTGCA AAATGTATGA
 
Protein sequence
MKPEKLILAD ALTLFLKDLN TKFIFGVSGA NIEHLHDSIY RLGDNKLSAI LAKSEFSASF 
MADGYARTHN TLGVCCSTSG GAMVNLAVGI AESYADNVPV LAIIGQSPTF LEGKGAFQDC
SGKTNTLDGL SFWQSITKYA VKITRPEQFW DSVEQALKSA FHKIPGPTAL LIPRDLFEAE
VHQRPNHLST NLIDYRAIHP HKSSSILALR KLLQQAQKPL MIVGKYAKYY QAAERIKNFA
HTFNCMVVTT LADVNAFAHN HPLYLGMVGI CGHLKAHDFI KDDADLIIVV EDDCSVMTTT
GVMSSLNNTP LVYLGTDSTK ACAAVQVDLA IEGDIQLILD QVLADYSGPA LAKYVQVSTP
MENHIQANSH LLTDKQHGNA GLSVSNAIES LAKFLPNVNQ VLFDAGNCVA ATSHFLNFPA
HIKTVIALGM GGMGYAIPAA IGAQLGNNAA QKSMVFTGDG GFLITGLEIQ TAVEYNLPVL
FIIFNNNMHG MCVTRQQLYF DKRITASSYG KIHIADLVKG LGSQENLWSS CVEDILSLES
SLHDYYTHHS CKTGVLEIKV TIEELPPFIP FLVAKGEMQV DNNKMLQNV