Gene Aasi_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0112 
Symbol 
ID6377709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp129020 
End bp131332 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content38% 
IMG OID642681304 
Productcyclin domain-containing protein 
Protein accessionYP_001957289 
Protein GI189501572 
COG category[T] Signal transduction mechanisms
[A] RNA processing and modification 
COG ID[COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CTTATTCAGT AGCCCAGCAA TATATAAACT ATGTTTTATT TGTAAGCTTA 
TTTTTACAAA GCTGCTGTGG TCTCAATAAT CCACTTATTC CAATTCGAAA GGAACAAACA
GCACCTATAC GAACTGATGT ACAAGAATTA ATACCACAAA TCAACATTGA GTCTTTAATA
GGTCAAGAAC TTATAGCCCA AGGAGAGCAT ATTGTTACTT TTTATAAAGA AGCAGGTAAG
GTAAAAGCAA ATGTAAAGAT AAATGCACCA AAAGGGTTTA GTAAATTCCA CGTGGGAGCA
GAAGTATTAT TAGAAAAAGA AGCAGAATGT ATGAATTTAT CTCGGTTAAA TAAACAAGCA
CAACTCCGCC GCATCCATTT CCAATCAGGG CAAGTGGGTC AGCCTGCTAA AGTAATTATC
TATAAGAATG CAGGATTGAT GGGAGGTGGA AATATTATTG TTAAGCAACA GAGCAATCCA
GACGAAGAAG AAGATTATGA AGATGAGGAA ACAGAGGAGC AAACAACAGA AGAAGAAAGA
GAACATAAAG GAAAAAGGGA AGAGGAGGTA AAAACAGACG GGAAAATACA AAAACAAACA
TCTGTAATAT TTAAGCCAAG AAGAGGATAT CAAGAGGAAG CTACACTTCA GGCAGATAGT
AATACGGGAA GTTATCAAGC TTTGTTAACA GCAGCTATAA ATGGAAATGT AGAAGCGCAG
CTCCAGCTAG CACAAAAGTC ATATCAGGAA ACACTAATAT GTTTGCATAA AGCCGTGGTC
CAAGATTATA GAGGTGCCAC GATGTTATTA AAAAAGATAA AGCTATCTAA TATTGGTCAG
GAGGCGCAAG AACGAGAGAT TCCTATAGAA ATATGGGGCA GAATCTTATC ACATGTACCG
TTAGAAGATA TATTCTCTGC TAGATTAGTT AATCACCTTT TTTATGAGCT TATTACAGGA
GATAGGAGCA TAGGTATGAT TGGGCTAAAA AATAAGCTTA AGCCTATAGC ACATGGATAC
CGTTGTGCAA TAGACAAAAT TATACATTTT CGTAGTGATA AACTAGTCAA ACTTACACCC
CAAACCATAC CTAGCTTTCC TTTTTATTGT TTAATGAGAC ATGTTACGGA TTTACCAGTA
GCCTTTTACC CACATTTAAA AGATACGGAT ATACATACGC TTGAGTTAAG AAATAAAGCA
GGAGCAAAAA GGGCAATAGA ATTAGCTAGA GCGCTACAAG GGACGCAGGT GCATACGCTT
AATTTAAGGT TTAACGAAAT AGGAGCAGAA GGGGCGATAG AAGTAGCTAA AGCGCTACAA
GGAACGCAGG TGCATACACT TGATTTGGTC TATAATCAAA TAGGAGCAGA AGGGGCGATA
GAAGTAGCTA AAGCGTTACA AGGGACGCAG GTGCATAAAC TTGATTTAAG TAATAATCAA
ATAGGAGCAG AAGGGGCGAT AGAAGTAGCT AAAGCGTTAC AAGGGACGCA GGTGCATACG
CTTAATTTAA TGGGAAATCA AATAGGTAAT GAAGGTGCGA TAGAATTAGC TAAAGCGCTA
CAAGGGACAC AGGTGCATAC GCTTTATTTA AGACGTAATC AAATAGATAA TGAAGGGGCG
ATAGAAGTAG CTAAAGCGTT ACAAGGGGCT CAGGTACATA CGCTTAGTTT AAGCGATAAT
CAAATAGGAG CAGAAGGGGT AATAGAATTA GCTAATGCAC TACAAGGGAC TCAGGTACAT
ACACTTTATT TAAGTCATAA TCAAATAGGT AATGAAGGGG CGATAGGATT AGCTAAAGCG
TTACAAGGGG CTCAGGTATA TACACTTGAT TTAAGTCATA ATCAAATAGA TAATGAAGGG
GCGATAGGAT TAGCTAAAGC GTTACAAGGG ACGCAGGTGC ATAAACTTGA TTTAAGTCAT
AATCAAATAG ATAATGAAGG GGCGATAGGA TTAGCTAAAG CGTTACAAGG GACGCAGGTG
CATAAACTTG ATTTAAGTCA TAGTAAAATA GATAATGAAG GGGCGATAGG ATTAGCTAAA
GCGTTACAAG GGACGCAGGT GCATACGCTT AATTTAATGA TTAATGAAAT AGGTAACGAA
GGGGCAATAG GATTAGCTAA AGCGCTACAA GGGACACAGG TGCATACGCT TGATTTAATG
GCTAATGCAA TAGGTAACGA AGGGGCAATA GGATTAGCTA AAGCGCTACA AGGGACACAG
GTACATACGC TTGGTTTAAG CGCTAATCAA ATAGGCAATG CTACAAAACA ATTACTTGTC
GAACAATATC CTCATATTAA GTGGAAGTTT TAA
 
Protein sequence
MKKAYSVAQQ YINYVLFVSL FLQSCCGLNN PLIPIRKEQT APIRTDVQEL IPQINIESLI 
GQELIAQGEH IVTFYKEAGK VKANVKINAP KGFSKFHVGA EVLLEKEAEC MNLSRLNKQA
QLRRIHFQSG QVGQPAKVII YKNAGLMGGG NIIVKQQSNP DEEEDYEDEE TEEQTTEEER
EHKGKREEEV KTDGKIQKQT SVIFKPRRGY QEEATLQADS NTGSYQALLT AAINGNVEAQ
LQLAQKSYQE TLICLHKAVV QDYRGATMLL KKIKLSNIGQ EAQEREIPIE IWGRILSHVP
LEDIFSARLV NHLFYELITG DRSIGMIGLK NKLKPIAHGY RCAIDKIIHF RSDKLVKLTP
QTIPSFPFYC LMRHVTDLPV AFYPHLKDTD IHTLELRNKA GAKRAIELAR ALQGTQVHTL
NLRFNEIGAE GAIEVAKALQ GTQVHTLDLV YNQIGAEGAI EVAKALQGTQ VHKLDLSNNQ
IGAEGAIEVA KALQGTQVHT LNLMGNQIGN EGAIELAKAL QGTQVHTLYL RRNQIDNEGA
IEVAKALQGA QVHTLSLSDN QIGAEGVIEL ANALQGTQVH TLYLSHNQIG NEGAIGLAKA
LQGAQVYTLD LSHNQIDNEG AIGLAKALQG TQVHKLDLSH NQIDNEGAIG LAKALQGTQV
HKLDLSHSKI DNEGAIGLAK ALQGTQVHTL NLMINEIGNE GAIGLAKALQ GTQVHTLDLM
ANAIGNEGAI GLAKALQGTQ VHTLGLSANQ IGNATKQLLV EQYPHIKWKF