Gene Aasi_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0105 
Symbol 
ID6377711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp121286 
End bp122032 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID642681297 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001957282 
Protein GI189501565 
COG category[R] General function prediction only
[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT TTATAGGTAA AACAGCGCTT ATTACAGGAG CTTCTCGAGG AATCGGAAAA 
TCAATTGCTC ATGCATTTGC AGAGCAAGGA GCCAATATTG TATTTACCCA TCTTTCCAGT
GAAGAGCAAG CTCAAGCTGT AGTAGATGAA TTAAAAAGTT TTGGTGTAAA AGTTTGTGCC
TACCGATCTG ATGCATCCAA TTTTACTGCA GTTAATGACC TAGTGCAAGA AATTATAAAA
GAATTTGGCG GGTTGGATAT ACTGGTAAAC AATGCAGGAA TAACTAGAGA CAATTTACTA
TTACGCATGG GTGAGCAAGA TTGGGATGAT GTAATACAAG TCAATCTAAA ATCTGCCTTT
AATACAGTAA AAGCAGCTGC AAAGCCTATG ATTAGTCAGC GCTCTGGATC TATCATTAAC
ATTAGTTCTG TGGTAGGTAT TAAGGGTAAT GCAGGGCAGG CAAACTATGC TGCTTCTAAA
GCAGGTATGA TTGGTTTTAC TAAATCCATT GCTTTAGAGC TAGGATCAAG AAATATTCGT
TGTAATGCTA TTGCCCCTGG CTTTATACAA ACAGCTATGA CAGAAGAGCT ACCAGAAGCT
ACTGTTGCAG AGTGGGTTAA ACATATTCCT TTAAGGAGAA TGGGGACTAC AGAAGATGTG
GCTAAGTGTG CTTTGTTTTT AGCTTCTGAT GCAGCTAGCT ACATAACTGG CCAGGTTATT
CAGGTAGACG GAGGTATGCT TACATAG
 
Protein sequence
MKQFIGKTAL ITGASRGIGK SIAHAFAEQG ANIVFTHLSS EEQAQAVVDE LKSFGVKVCA 
YRSDASNFTA VNDLVQEIIK EFGGLDILVN NAGITRDNLL LRMGEQDWDD VIQVNLKSAF
NTVKAAAKPM ISQRSGSIIN ISSVVGIKGN AGQANYAASK AGMIGFTKSI ALELGSRNIR
CNAIAPGFIQ TAMTEELPEA TVAEWVKHIP LRRMGTTEDV AKCALFLASD AASYITGQVI
QVDGGMLT