Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0101 |
Symbol | |
ID | 6376594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 117463 |
End bp | 118194 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642681293 |
Product | DNA repair protein RadC |
Protein accession | YP_001957278 |
Protein GI | 189501561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAACA ACAACTCTAA CTTACCAAGC CAAAACACAG AAGCATCTTA TTTAAAGATA CAAGATTGGG CTAAGGAAGA TCGTCCTAGA GAAAAATTAA TACAAAAAGG GCCCAGTGTA CTAAGCGAAG CAGAGTTGAT TGGAATTTTG CTTGGCTCAG GCACCAAAAA TCTAAGTGCT GTAGGCTTGG CTCAAGCTAT TTTAAAACAC CATAATTATG ATTTAAATGA GCTTGCTAAA CGATCTGTAA AAGAACTCCA AAAATTTAAA GGTATAGGAG AAGCAAAAGC TGTATCTATT GTAAGTGCTA TGGAGCTAGG TAGAAGGAGA AAGGCCAAAG AAAAGTTACA AAAACCACGG ATCACCAGCT CGTTGGAAGC TTATGAGCTC ATGAGAATGG AACTATCAGA TAAGGTCATA GAAGAGTTCT GGATTGTAAC CCTTACACGT GCTAACTACG TTATTAAAAA GCATTTAATA AGTAGTGGGG GTACTGCACA GCTAGCAGTA GATCCTAAAG TTATTTTTAA GACAGCAATA GACCATCATG CTGCCAGCAT AATCTTGGTA CATAATCATC CTTCTAATAA TCCTAAGCCA AGTGAATTAG ACATACAATT AACAGAGCGC CTTGTAAAAG GAGGAAAGAT CTTAGATATA CCTATTTTAG ACCATATCAT TTTTACAGAG GACACCTATT TTAGCTTTGC AGACGAGCAT GTGGTGATAT AA
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Protein sequence | MENNNSNLPS QNTEASYLKI QDWAKEDRPR EKLIQKGPSV LSEAELIGIL LGSGTKNLSA VGLAQAILKH HNYDLNELAK RSVKELQKFK GIGEAKAVSI VSAMELGRRR KAKEKLQKPR ITSSLEAYEL MRMELSDKVI EEFWIVTLTR ANYVIKKHLI SSGGTAQLAV DPKVIFKTAI DHHAASIILV HNHPSNNPKP SELDIQLTER LVKGGKILDI PILDHIIFTE DTYFSFADEH VVI
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