Gene Aasi_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0092 
Symbol 
ID6376683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp106022 
End bp109009 
Gene Length2988 bp 
Protein Length995 aa 
Translation table11 
GC content35% 
IMG OID642681284 
Productbifunctional preprotein translocase subunit SecD/SecF 
Protein accessionYP_001957269 
Protein GI189501552 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00966] protein-export membrane protein SecF
[TIGR01129] protein-export membrane protein SecD
[TIGR00916] protein-export membrane protein, SecD/SecF family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AAGGGCTTAT TATATTTTTA ACCACCATAG TCTCATTACT TTGTTTATAC 
TATTTATCTT TCTCTGTAAT TGATGCCAAT GTACAAAGAA AAGCTACTCA ATATGCCACC
AGTCAGAATG GCAACCTTGA CTTTTTAAAA AAACAAGCAT ATTTAGACGA TGTATGGAAA
AAGCCTGTAC TGAATTTGTT TGGATTAACA TATACTTATG AAGAAGTAAA AGAAAATGCA
CTCAACCTAG GCTTAGATCT ACAAGGTGGT ATGCATGTAA CTTTAGAAGT ATCACCAGTA
GAACTAATCC AAGGACTATC AGGTAACTCT AAAGATGAAA AATTCTTAGC TGCCATTAAG
ATGGCTGAAC AGAAACAGCA CACTAAAGCT TCCCTTCCTT TTACAAAACT CTTTTATCAA
GCTTATAAAG AAATTTCTCC AGAAGGAAAA TTCAGTGATA TATTCGCCAC TGCTGCTAAT
AGAAATCGCG TAACTCGTCA TGCAAGTGAT CAAGAAATTT TAAAATATTT AGATACAGAA
ATTGAGCATG CTATAGATAG AGCTTTCGAA ATCATCAGGT CTCGTATAGA TCGCTTTGGG
ACCTCACAAC CTAATATCCA GCGCTTACAA GGTACAGGTA AAATACAGAT AGAATTACCT
GGTGTTAATA ATCCTGAACG TGTTCGAAAA CTATTACAAG GAGTTGCACA ATTAAGATTT
TGGAAAGTAT ACGAATTATC TCAGATTGAT AAAATTCTCC AGGCAGTTAA CAGCCTATTA
GTAGCAGAAG AAAAAGGAAA GGCTAAAGTA GAACCAACTA AGCCGTCTGA TAATGCTAAT
AATAGCGCTG CAAAAGAATT AACAGCTCAA TTGGAACAAG GGATAAGCAC CCCTAAGGAA
CAGGACGAGA ACATTATCTC TCCTCTCTAT AAATTACTAA AACTAAAACC AGGCCATGGA
TTAACTTATA GCGTAGAAGA TATCCATATC ATCCAACAAA TACTAGAAAG ACCAGATGTA
AAACTACTTT TTCCTAAAGA TTTGATGTGG TTATGGGACG TTAAGCCACA TAAATTAGAG
AATGGAACAG AAGTATTATC CGTACATCCT ATCCAAATAG GAAAAAACAA TCTTCCCTTA
CTAGAAGGAG ATGTAATAAC AGATGCTCGC CAGGTTTTTG ATAAATATGG TAAGCCGGCT
GTAAGCATGC AGATGAATGG GCAAGGTGCC AAGCTTTGGA AAAATATTAC AGCTAGTAAT
ATTGGAAAAA GTATTGCTAT TACATTAGAT AACAAAGTTT ATTCAGCTCC TACTGTTAAT
ACAGAAATTC CAGATGGGAA TTCTCAAATA ACAGGCAACT TTAGTATAGA AGAAGCAAAA
GATTTGGCAA ACATTCTTAA GGCAGGCTCA TTGCCTGCTC CTGTTAAAAT TACAGAAGAG
GCCATTATAG GACCCACTTT AAGTAAAACA GCTCAAGCAC AAGGTATTAC TTCTATGGCT
TTAGGATTAG CTGTAGTAGT TCTATTTATG CTGCTTTACT ATGCAAAAGG TGGTATAGTC
GCTAACTTAG CACTTCTCTT CAATATTTTA TTTATACTAG GTATTTTAGC ACAATTTAAT
GCTGCGCTCA CACTATCTGG TATTGCAGGT ATTGTGCTTA CTATAGGCAT GTCAATAGAC
GCAAACGTAC TTATTTTTGA ACGTATTCGA GAGGAGTTAA GAATAGGAAA CAAAATGAGA
GAGGCTATTA ATAAAGGCTA TCAAAAAGCC TATAGTTCTA TTATTGACTC TAATGTCACC
ACATTTTTAA CGGGTGCTAT ACTATACGGC TTGGGACAAG GTCCTGTTCG AGGATTTGCG
ACTACATTAA TGATTGGTAT TGTTACCTCC TTTTTCACAG CAGTATTTAT TACAAGACTT
ATTTTTACTT GGTGGGCAAA GAACAGTAAA GAAGATAATA TTAGTTTCTC TTTTGTGTTT
AACAAGAATG TGTTAACCAA CTGCCGCATA GACTTTATGG GTAAACGAAA ACTGTTTTAT
GTAGCATCTA GCTTATTTAT TGCTATAGGC CTTCTGCTAA TTGTTAAGCA AGGAGGACTT
AACTTAGGTG TGGATTTTAC AGGTGGCAGA TCCTATGTAA TCAATTTTAG CGAGCCTGTG
GAAACGGCAC TTTTAAAAAC TAAACTAGCA GAACAGCTAG GAGATCAAAG TACCGAGGTT
AAGTCATATG GAGCCAATAA CGTTGTAAAA ATCACTACCA GCTATTTGAT ACAAGAGACC
TCTTCAGAAG CTGAAGAAAA AGCTAAAAAT ACGCTGGTAA GCAGCATACA AGAGTCTACT
AAATTTAGTT ATACAGATGA TGTAACAGGC GCTAAAAATC CAAGCTTCGC TATTGTTAGT
ATTTCTAAAG TAGGACCAAG CATAGCAGGA GATATACAAG CATCTGCTAA AAAATCAATT
ATTTTTTCAC TGCTCGTTAT ATTTGGCTAT ATAGTTATAC GGTTCCGCCG ATGGCAGTTT
GGGCTTTCAG CTGTTATAGC TTTATTGCAC GACAGTCTTA CTGTATTTAC AACTTTTGCT
ATAGCTAGAG CTTTTGGATA TACTTACGAG ATAGATCAGG TTTTTATAGC CGCTATACTT
ACTATTATTG GGTACTCCAT TAACGATACT GTTGTAATAT TTGATCGTAT TCGAGAAATG
CAGCGTTTAC ATCCTAACGA GAATTTTACT TCAATAGCCA ATAAATCCAT TAACGACACT
TTAAGCAGAA CCTTAATTAC TTCATTTACT ACTTTAGTAG CTGTATTCAT TCTATTCGTA
TGGGGTGGTG AGGTTCTTAG AGGTTTTTCT TTTGCATTAC TAGTAGGAAT TACTTTTGGA
AGCTACTCTT CTATATGTAT TGCTGCACCA CTTATTTTAG ACTTTAGCAA AAGAAACTAT
CAAAAAAGAA TTATTAATAA GGATACCAAT CCTTATGCAA AGAGATAG
 
Protein sequence
MKNKGLIIFL TTIVSLLCLY YLSFSVIDAN VQRKATQYAT SQNGNLDFLK KQAYLDDVWK 
KPVLNLFGLT YTYEEVKENA LNLGLDLQGG MHVTLEVSPV ELIQGLSGNS KDEKFLAAIK
MAEQKQHTKA SLPFTKLFYQ AYKEISPEGK FSDIFATAAN RNRVTRHASD QEILKYLDTE
IEHAIDRAFE IIRSRIDRFG TSQPNIQRLQ GTGKIQIELP GVNNPERVRK LLQGVAQLRF
WKVYELSQID KILQAVNSLL VAEEKGKAKV EPTKPSDNAN NSAAKELTAQ LEQGISTPKE
QDENIISPLY KLLKLKPGHG LTYSVEDIHI IQQILERPDV KLLFPKDLMW LWDVKPHKLE
NGTEVLSVHP IQIGKNNLPL LEGDVITDAR QVFDKYGKPA VSMQMNGQGA KLWKNITASN
IGKSIAITLD NKVYSAPTVN TEIPDGNSQI TGNFSIEEAK DLANILKAGS LPAPVKITEE
AIIGPTLSKT AQAQGITSMA LGLAVVVLFM LLYYAKGGIV ANLALLFNIL FILGILAQFN
AALTLSGIAG IVLTIGMSID ANVLIFERIR EELRIGNKMR EAINKGYQKA YSSIIDSNVT
TFLTGAILYG LGQGPVRGFA TTLMIGIVTS FFTAVFITRL IFTWWAKNSK EDNISFSFVF
NKNVLTNCRI DFMGKRKLFY VASSLFIAIG LLLIVKQGGL NLGVDFTGGR SYVINFSEPV
ETALLKTKLA EQLGDQSTEV KSYGANNVVK ITTSYLIQET SSEAEEKAKN TLVSSIQEST
KFSYTDDVTG AKNPSFAIVS ISKVGPSIAG DIQASAKKSI IFSLLVIFGY IVIRFRRWQF
GLSAVIALLH DSLTVFTTFA IARAFGYTYE IDQVFIAAIL TIIGYSINDT VVIFDRIREM
QRLHPNENFT SIANKSINDT LSRTLITSFT TLVAVFILFV WGGEVLRGFS FALLVGITFG
SYSSICIAAP LILDFSKRNY QKRIINKDTN PYAKR