Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0028 |
Symbol | |
ID | 6376670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 37868 |
End bp | 40612 |
Gene Length | 2745 bp |
Protein Length | 914 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642681228 |
Product | hypothetical protein |
Protein accession | YP_001957214 |
Protein GI | 189501497 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTAT TTTATTTATT TAGAAAAGGT AAATTTCTGT TAATTCTAGG TATCCTACTA GTTGTAGGTA GTCTAAATAA CATAGTAGTA AAAGCCACCA CTTCTGAAAG ATGGCAACGT ATCCGTACAC CCCACTATGA TATTATATTC TTGTCTGAAA TGGCCCGTGA AGCACAGCGG ATGGCCAATA CATTAGAAAT ATTATATTTC CCTGTAAGCA AGACACTCTC TACAATACCT AAACGCATAC CTATTATACT CAAAAGCCAA ACAGCCATAC CTAATGGAAT CACGATATTA GGACCTCCTA GAAGAGTAGA ATTTTTTACG TTTCCTCCTC AAGACTATAC TTACATACTT AATAACGACT GGCTTAACTT ATTAGCACTC CATGAACTAA GGCATGTAGT TCAGCATGAA ATTATGCTTA AGAATCAGAT GATATCTTTT GGCGTCCCTG ACTGGAATTG GATGTTAGAA GGCGATGCAG TAGGAACAGA AACAGCATTA TCTAAAGCAG GCAGAGGAAG AGCTCCTTAT TTTGAACTAT TATATAAAGT TAATTTATTG GAACGTGGTG GATTCAGTTA TTTTAAACAG ATGAACCGCT CCTATCAGCA TCAAATTCCA GACCATTACC GAATGGGGTA TTTTATCACA ACTTATCTCA AAAGAAAATA TGGTACTGAT ATCATCAGTA AACTGATGCA AAGAGATAAT ATTTGGGAAA TCATTAATCC ATTCACTTTA CATAATAGAT GCAGAAAGTT AACAAGTAGA TCTTTAACTC AAATTTATCA GGATGTAAAT ACCGAACTCA AAGAATTATG GTCAAAACAA CTAGAAGACC TAAAAATTAC ATCTTTTCAT CCTATACATA CTAGAAACTC AGAAGAATAT ACAGACTATA AGTACCCTCA ACCAATTTCA TCAGGCATTA TAGCAATTAA ATCTGGTATA GGAACAATAA CCCATTTTAC CTACATTAAT GAAACGGGAA AAGAAAACCA TATTTTTACA CCCGGCCCTA TTGACTCAGA TATACGATTT TCAGCAGCCA AAGATAAAAT AGTTTGGATA GAACACATGC CTGCATTACG CTGGGAACAT AAACGATACA CTGCTATTCA ATCCTATAAC ATTACAACTA AAAGATATAA AACAATTGCC TACCCTAGCA GATATAGTAC TGCTGCACTA TCGCCCAATG CTACTAAACT AATTGCTGTT GAAACGGATG AGGCATATAA TCATAAACTT ATGGTTTTAG ATGCAGAGAC TGGCGCAATA CTATGCTCTT TACCCAACCC TGCAAACCAT TACTATTTAA CTCCTATTTG GTCATCAGAT GGGAAATATA TAGTAACTGT AAAACATGTG CAGAATAAAG CTGGTATTAG CCTTATTGAT CCACAAACAG GCAAGAGCCA AGATATACTA CCTTATACTG AAGAGCTTAT TGGTTGTCCG ATTTTACATG GTTCTTATAT ATACTATAGC AGTGCTTATA GTGGTATAGA TAACATTTAT GCCGTGCACA TTAACACCAA GCAACGATTT CAAGTTACCT CTAGTAAATA TGGTGCTTAT AACCCTGCTG TCTCAACAGA TGGTAAATGG CTGCTATACA ATGATTTTGG TAAAGATGGT ATGAATGCCG TAAAGATATT TCTGGATTCT ACACAATGGA CACCTATTGA AAAAGTAGAA GATAAAAATA TCCATTATTA CCAACCACTT ATAGACCAGG CCGATATTTT AAACCAGGTT CCTAATAACA CATATGCTAT TGAAGAATAC ACCACTTGGA AAAATTTTAA TAATGTTCTT CCTCAATTTA CCAAGCTATC AACTCATAAT TATCAAGATA ATATTATGGG AGGCTTTGTA TTTAGAGATA TTTTAGGGGA GTCAGAATTA GTATTACCTG GATTAGGTTA TAAATGGCAT AAGTTTACAA AACATACAGG ACGTATTTTT ACTAGATTTA CTTATAAAAG ATGGTATCCG ATTATAGATA TTAATGCCAG CATTTTACCT ACAATTCGGA TAAAAGACGA CGCTACAGAA ATATCGACAT CTCAAGAGTA TCAATTAAAC TTAACCCTGC CTTTTACCTG GAATTTCCAT GCCTATACGT ACAATATTGT ATTAAATACA TCTACTATAA TTAAGAATTT AACCAAATCA AATACATGGG TACGTCAGCA AACTTATATA GCTTACTTTT CTAGATTTTC GAAAAAAAGC CTCAGAGATA TCTATAGCCC ATGGGGCCAA AAATTTAAGG TAGATTATAT ACATACTCCA TATGGAGGGC CACAATTAAA GGGAGTAGGA ATAAACTTAA AAGTATATTT TCCTGGCTTA TACAAACATC ATTCATTCCG CATAGGTATG AAGCAACAAC ATAATTTAAG TAAAATTAAC TCAATAAGTT TCTTTAAAAT TCCTAGAGGT CTTGATAAGC AAGAAAGCTA TCAAAATTCA CATAGAACAC ATAGAATAAG TGTGAATTAT GCTTTTCCTA TTAGCTATCC TGATATTCAC GTAACGCCAT TTGTATTTAT AGAACGTTTA AGAGCCAACT TATTTTATGA TTATGGTTAT CATTTTGTTC AAGAACGATC ATATCATATT ATTGGAGCAG ATTTTATAAT AGATACTCAA TGGTTCCAAG TGGGCCTACG CTGTATGTAT AAAATAAATA CTAATGATAG AATGGCTAAT GTATTACTAA AGTAA
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Protein sequence | MLLFYLFRKG KFLLILGILL VVGSLNNIVV KATTSERWQR IRTPHYDIIF LSEMAREAQR MANTLEILYF PVSKTLSTIP KRIPIILKSQ TAIPNGITIL GPPRRVEFFT FPPQDYTYIL NNDWLNLLAL HELRHVVQHE IMLKNQMISF GVPDWNWMLE GDAVGTETAL SKAGRGRAPY FELLYKVNLL ERGGFSYFKQ MNRSYQHQIP DHYRMGYFIT TYLKRKYGTD IISKLMQRDN IWEIINPFTL HNRCRKLTSR SLTQIYQDVN TELKELWSKQ LEDLKITSFH PIHTRNSEEY TDYKYPQPIS SGIIAIKSGI GTITHFTYIN ETGKENHIFT PGPIDSDIRF SAAKDKIVWI EHMPALRWEH KRYTAIQSYN ITTKRYKTIA YPSRYSTAAL SPNATKLIAV ETDEAYNHKL MVLDAETGAI LCSLPNPANH YYLTPIWSSD GKYIVTVKHV QNKAGISLID PQTGKSQDIL PYTEELIGCP ILHGSYIYYS SAYSGIDNIY AVHINTKQRF QVTSSKYGAY NPAVSTDGKW LLYNDFGKDG MNAVKIFLDS TQWTPIEKVE DKNIHYYQPL IDQADILNQV PNNTYAIEEY TTWKNFNNVL PQFTKLSTHN YQDNIMGGFV FRDILGESEL VLPGLGYKWH KFTKHTGRIF TRFTYKRWYP IIDINASILP TIRIKDDATE ISTSQEYQLN LTLPFTWNFH AYTYNIVLNT STIIKNLTKS NTWVRQQTYI AYFSRFSKKS LRDIYSPWGQ KFKVDYIHTP YGGPQLKGVG INLKVYFPGL YKHHSFRIGM KQQHNLSKIN SISFFKIPRG LDKQESYQNS HRTHRISVNY AFPISYPDIH VTPFVFIERL RANLFYDYGY HFVQERSYHI IGADFIIDTQ WFQVGLRCMY KINTNDRMAN VLLK
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