Gene Aasi_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0026 
Symbol 
ID6376446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp35559 
End bp36683 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content38% 
IMG OID642681226 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001957212 
Protein GI189501495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTG AACTACAGCA TGTAGATGCT TCTTCCAAGG CACGTGCTGG TATTATTACC 
ACTGCTCATG GAAAAATACA TACTCCTATC TTTATGCCTG TCGGTACTGC AGGAACCGTC
AAAGCTGTAG AACAACGTAA TCTGCATCAG GATGTAGAAG CTGAAATTAT ACTAGGTAAT
ACCTACCATC TTTATTTACG GCCAGGTACA CAAGTACTAG ATGCTGCTGC TGGGTTACAC
CAGTTTATCA ATTGGCATAA ACCCATTTTA ACAGATAGTG GTGGTTATCA AGTATATTCT
TTGACCCAAC GTAGAAAGAT TACAGAACAA GGTGTTACAT TTTGTTCACA TATAGACGGT
TCTAAACATA CATTTACTCC AGAAAATGCA GTAGATATAC AAAGAAGTAT AGGGTCTGAT
ATTATGATGG TATTGGATGA ATGTACCCCC TACCCTTGTA CCTATGCATA TGCTAGACAA
TCTATGGAAA TGACCCACCG TTGGTTACAA AGGGGAATTG CACAATTCAA TAAAACAACC
AACGATATCA ATAATTATCA GAACTTGTTT CCTATTGTAC AAGGCAGTAT CTACAAAGAT
CTTAGGGTAC AATCAGCAGA AACGATTGCA GCAGCCAACC AACCTGGAAA TGCTATTGGA
GGAGTATGTC ATCCTACAGG ACAACTATAC GAAGTTACAG AATGGGTCTG TGACATCTTA
CCTAATGATA AACCACGTTA TCTGATGGGC GTAGGAACAC CCCGCGACTT GCTAGAATGT
ATTGCATTAG GCGTAGATAT GTTTGATTGT GTTATGCCTA CCCGCAGTGG CAGAAACGGC
AGGTTATATA CTACCGAAGG TATTATTAAT ATTAAAAATA AAAAATGGAG GCATGATTTT
AGTGTTATAG ATTTACAACT GAATAGCTAT GTGAGCAACC ACTATACCAA GGCGTATTTA
CACCATTTGT TTAAAGCACA AGAAATACTA GGAGCACAAA TTGCGAGTAT ACATAACCTT
ACTTTCTATT TATCGCTTGT TAAACAAGCT AGACAACATA TTTTGTCAAA TACTTTTGTA
CCTTGGAAAA CAAGTATACT TCGAAAAATT ATGGAAAAGC TGTAG
 
Protein sequence
MQFELQHVDA SSKARAGIIT TAHGKIHTPI FMPVGTAGTV KAVEQRNLHQ DVEAEIILGN 
TYHLYLRPGT QVLDAAAGLH QFINWHKPIL TDSGGYQVYS LTQRRKITEQ GVTFCSHIDG
SKHTFTPENA VDIQRSIGSD IMMVLDECTP YPCTYAYARQ SMEMTHRWLQ RGIAQFNKTT
NDINNYQNLF PIVQGSIYKD LRVQSAETIA AANQPGNAIG GVCHPTGQLY EVTEWVCDIL
PNDKPRYLMG VGTPRDLLEC IALGVDMFDC VMPTRSGRNG RLYTTEGIIN IKNKKWRHDF
SVIDLQLNSY VSNHYTKAYL HHLFKAQEIL GAQIASIHNL TFYLSLVKQA RQHILSNTFV
PWKTSILRKI MEKL