Gene Aasi_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0020 
Symbol 
ID6376854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp25639 
End bp26496 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content37% 
IMG OID642681220 
ProductHemK family modification methylase 
Protein accessionYP_001957206 
Protein GI189501489 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific
[TIGR00536] HemK family putative methylases 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA GCAGTAGAGT TCTTTATAAT AATCTATACC AACGTATTTT ACCAGCTGTA 
GAAAGCCCTG GTGAATGCCG TGCTATTGTA CTGCGCCTTG TAGAATATTA TTTTCAAATA
GATGCATTAG CCATTACCTT AGATAAGCCA CTAGTGCATA CATTTTCTAC AGACATATTG
GCAGAGATTG TACAGCGCAT TCATCAACAC GAACCTATTC AGTATATCCT AGGGGAGGCC
CCTTTTATGA ATAGAAACTT TTTTGTCAAC CCGTCTGTAC TTATTCCCCG TCCAGAAACA
GAAGAACTCG TGCAGTTAAT AATAAAAGAA AATAGTAAAC CAGGCTTACA TATATTGGAT
ATAGGGACAG GAAGTGGTTG TATTGCTATT ACGCTAGCAA AAGACTTATC AGATGCTCAA
GTAGATGGCT TAGACATTAG CGAACCAGCT TTAAAAGTAG CACGTTCCAA TGCTCAACGT
TTACAGGCAA ACGTAAATTG GATACAAGCT AATATATTGC AAGATCCATT ACCTGGAAGA
AAATGGGATA TTATTGTAAG CAACCCACCT TACGTATGTT TATCAGAAAA AGAACAGATG
CAACAACGTG TACTCGCTTA TGAGCCTGCA CAAGCTATTT TTGTTTCAGA CGAGGCACCT
CTTATATTTT ATGAGCAAAT TATACAGCTT GCTTCAACAT ATCTACAACC TACAGGGAAA
CTATACCTTG AAATTAATGA AAGGTTCGGC TTAGCATTAG CTTCTAAGCT AGCTGACAAA
CAATTTAACA ATATTTATAT TGAACAAGAT TTACAGGGTA AAGATAGATG GGTTAAAGCC
ACCGCGCCAT ATCAATAA
 
Protein sequence
MIKSSRVLYN NLYQRILPAV ESPGECRAIV LRLVEYYFQI DALAITLDKP LVHTFSTDIL 
AEIVQRIHQH EPIQYILGEA PFMNRNFFVN PSVLIPRPET EELVQLIIKE NSKPGLHILD
IGTGSGCIAI TLAKDLSDAQ VDGLDISEPA LKVARSNAQR LQANVNWIQA NILQDPLPGR
KWDIIVSNPP YVCLSEKEQM QQRVLAYEPA QAIFVSDEAP LIFYEQIIQL ASTYLQPTGK
LYLEINERFG LALASKLADK QFNNIYIEQD LQGKDRWVKA TAPYQ