Gene Aasi_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0018 
Symbol 
ID6377699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp23304 
End bp24014 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content37% 
IMG OID642681218 
Productlipoprotein signal peptidase 
Protein accessionYP_001957204 
Protein GI189501487 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA AAGTTTGGAA GTTTTATGGT ATAGCACTAT TAGCTGTTGT AATAGATCAG 
GTACTCAAGT TATGGGTATA CTTTAACATG CAAATGGGTA CGTTGGGCCA AATTAAATTA
CTAGGAAATT GGTTTAAACT ATTTTATACC TTAAATCCAG GCATGGCCTT TGGTATCCAG
TTTGGATTTA CTTATGATAA GGTATTACTC ACGATTATAC GTATCATAGC GACTTCTATG
ATTATCAAGT ATATATGGAA CTTAGCTAAA GAAACCAATA GTTCAAAATG GCTACTATGG
GGCTGGTCGC TGATACTGGG AGGAGCTGCT GGCAATGGGA TAGATAGTAT TTTTTATGGA
AAAATTTTGC ATAATGCACC TTATGGAGCA CCTATGAGCT GGTTTTATGG ACAGGTTATT
GATATGCTTT ATATTGATCT TTGGTCAGGT AGACTTCCAG ATTGGGTGCC ATGGTATTCA
GGATACTATG TGACTTGTCT ACCTGTATTT AACCTAGCAG ATGTAGCCAT ACTAGCAGGT
GTTGCACTTA TTGTTTTGGA TAAAAGAGCA AGTATTCAGC AGCCCGTGCA AAAATATGAA
GCAACAGAAG TAACTGATTC TGAACTTTTA GAAACTAGGC ATGAGTTAGT TGATCCTATA
ACAGAACATA ACAATACAGA GCATAACCAC CCAGAGGTAG AGGATAAGTA G
 
Protein sequence
MTKKVWKFYG IALLAVVIDQ VLKLWVYFNM QMGTLGQIKL LGNWFKLFYT LNPGMAFGIQ 
FGFTYDKVLL TIIRIIATSM IIKYIWNLAK ETNSSKWLLW GWSLILGGAA GNGIDSIFYG
KILHNAPYGA PMSWFYGQVI DMLYIDLWSG RLPDWVPWYS GYYVTCLPVF NLADVAILAG
VALIVLDKRA SIQQPVQKYE ATEVTDSELL ETRHELVDPI TEHNNTEHNH PEVEDK