| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0010 |
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| Symbol | trmD |
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| ID | 6377714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 12859 |
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| End bp | 13554 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642681209 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001957196 |
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| Protein GI | 189501479 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTTG ATATACTCAC TTGTTTGCCT AAATTACTAG AAAGCCCTTT TGCACACTCT
ATTTTGAAGC GTGCCATAGA CCGTAATTTA TTAAATTTAC ATATCCATGA TTTAAGAGAC
TATTCTCTTG ATAAGCACAA AAAAGTAGAT GACTATGCCT ATGGAGGTGC AGCAGGTATG
GTACTTGCTA TTCCACCTAT TGCTAGTTGT ATCAATCAGC TAAAAGAAAA AGTAGCATAC
CAAGAGATCA TTTATATGGC ACCAGATGGT GAACTGCTTA CACAACAGTT GGCCAATCAG
CTTTCTATGC AAGAGAATCT ACTAATATTA TGTGGTCATT ATAAGGGTGT TGATGAGCGT
GTGAGGCAAC ACTTTGTAAC ACGTGCCATT AGTATAGGAG ACTATGTGTT ATCAGGTGGA
GAGCTGGCAG CAGCTGTATT AGTAGATGCT ATCGTAAGAC TTTTGCCAGG CGTATTATCT
GATGAAACTT CTGCACTTAC TGACTCTTTT CAAGATAACT TAGTAGCGCC TCCAGTATAC
ACAAGACCTT ACAATTTTCA GGGTATGTGT GTTCCTGATA TTTTGCTTTC TGGCAATGAA
AAAGCTATTC GTGAATGGGA ATATCAAACT GCTATAGAAA GGACTAAACA ACTGCGTCCA
GAATTATACA ATAAGTTTAA TACAGATGTT GAGTAA
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| Protein sequence | MRVDILTCLP KLLESPFAHS ILKRAIDRNL LNLHIHDLRD YSLDKHKKVD DYAYGGAAGM
VLAIPPIASC INQLKEKVAY QEIIYMAPDG ELLTQQLANQ LSMQENLLIL CGHYKGVDER
VRQHFVTRAI SIGDYVLSGG ELAAAVLVDA IVRLLPGVLS DETSALTDSF QDNLVAPPVY
TRPYNFQGMC VPDILLSGNE KAIREWEYQT AIERTKQLRP ELYNKFNTDV E
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