| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1965 |
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| Symbol | ilvD |
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| ID | 6363714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2346981 |
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| End bp | 2348750 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642681174 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001955908 |
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| Protein GI | 189440827 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGA AGCCCATCAT CGCCATCGCC AACTCGTTCG ATGAGTTCCT GCCCGGCCAC
GTCCACCTCA ACAAGGTCGG CCGCATCGTT TCCGAGGCTA TCAAGGAAGC TGGCGGCATC
CCGCGCGAGT TCAACACGAT GGCCGTGGAC GACGGCATCG CCATGGGTCA CACCGGCATG
CTCTACTCCC TGCCCTCCCG CGACATCATC GCCGACACCG TCGAATACCA GTGCAACGCG
CACTGTGCCG ACGCACTCAT CTGCATCCCG AACTGCGACA AGGTCGTGCC GGGCATGCTG
ATGGCCGCCC TGCGCCTCAA CATCCCGACC GTGTTCGTCT CCGGTGGCCC GATGGAGGCC
GGCACCACGG TGCTCGCCGA CGGCACCGTC AAGAGCACCG ACCTTATCGA CGTGATGTAC
GCCACCGCCG ACGACAGCGT CTCCGATGAG GAACTGCTCA ACTATGAGAA GACCGTCTGC
CCGACCTGCG GCTCCTGCGC CGGCATGTTC ACCGCCAACT CGATGAACTG CCTGACCGAG
GCCATCGGCC TGGCCCTGCC CGGCAACGGC ACCATCCTCG CCTCCCACTC CTACCGCAAG
GACCTGTTCG AGCGTGCCGC CAAGCAGGTC GTCAAGATCG CCCACCAGTA CTATGACGAT
TCCGACGATT CCGTGCTGCC GCGCTCCATC GCCACCAAGG AAGCCTTCGA GAACGCCATG
ACCATGGATG TGGCCATGGG CGGTTCCACC AACACCGTGT TGCACATCCT CGCCATGGCC
CAATCCGCCG ACGTGGACTT CACCCTGGAC GACATCGAGC GTATTTCCCA CACCGTGCCG
TGCATCTGCA AGGCCTCGCC GTCCGGCAAG TGGGAGATTT CCGACGTGCA CCGCGCCGGC
GGCATCACCG GCATCCTCGG CGAGCTCGAC CGCGCCGGCA AGCTGCACAC CAACGTGCAC
TCCATCGACT ACCCGACGCT GGAAGCCAAG CTGGCCGATT GGGACATCAT GCGCCCGACC
TGCACCGAGG AAGCCCAACA GATGTACAAG GCCGCTCCTG GCCACATCAT CTCCCCGGAG
CCGTGGACCC ACACCACCCT GTTCGATTCG CTCGACCGTG ACCGCGCCAA CGGCGCCATC
CACGACATCA ACCACCCGGA GATTCACGAA GGCGGCCTCG CCGTGCTGCG CGGCAACCTG
GCCCCCGACG GCTGCGTGGT CAAGACCGCC GGTGTTCCGC CGGAGATCTG GAAGTTCCGT
GGACCGGCTC TGGTGGTCGA CTCCCAGGAG CAGGCCATCG AGGTCATTCT GAACGACACC
CTGAAGCCCG GCATGGCGCT TGTGATTCGT TACGAAGGCC CGAAGGGTGG CCCGGGCATG
CAGGAAATGC TGTACCCGAC CTCCTTCGTC AAGGGCAAGG GCATCGGCAA GCAGGTCGCC
ATGCTCACCG ACGGTCGCTA CTCCGGCGGT TCCTCCGGTC TGGCCATCGG CCACATGGCG
CCTGAGGCTG CCAACAAGGG CCCGGTGGCG CTCATCAAGA ACGGCGACAT CATCGATATC
GATATCGAAG CCCGTTCCGT GAACGTCGAA CTGACTGACG AGCAGCTGGA CGAGCGTCGT
CGCGAGCTTG AGGCTGGCGA CGGCTACGTG GCTCACCGCA ACCGCCACGT CTCCCAGGCG
CTGAAGGCGT ACGCCGCCTT CGCCCGCTCG GCCGACAAGG GTGCGACGCG TGACCCGGAG
CTGATCAACA AGCTCTCCGG TCTCGACTGA
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| Protein sequence | MGKKPIIAIA NSFDEFLPGH VHLNKVGRIV SEAIKEAGGI PREFNTMAVD DGIAMGHTGM
LYSLPSRDII ADTVEYQCNA HCADALICIP NCDKVVPGML MAALRLNIPT VFVSGGPMEA
GTTVLADGTV KSTDLIDVMY ATADDSVSDE ELLNYEKTVC PTCGSCAGMF TANSMNCLTE
AIGLALPGNG TILASHSYRK DLFERAAKQV VKIAHQYYDD SDDSVLPRSI ATKEAFENAM
TMDVAMGGST NTVLHILAMA QSADVDFTLD DIERISHTVP CICKASPSGK WEISDVHRAG
GITGILGELD RAGKLHTNVH SIDYPTLEAK LADWDIMRPT CTEEAQQMYK AAPGHIISPE
PWTHTTLFDS LDRDRANGAI HDINHPEIHE GGLAVLRGNL APDGCVVKTA GVPPEIWKFR
GPALVVDSQE QAIEVILNDT LKPGMALVIR YEGPKGGPGM QEMLYPTSFV KGKGIGKQVA
MLTDGRYSGG SSGLAIGHMA PEAANKGPVA LIKNGDIIDI DIEARSVNVE LTDEQLDERR
RELEAGDGYV AHRNRHVSQA LKAYAAFARS ADKGATRDPE LINKLSGLD
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