Gene BLD_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1958 
Symbolmrr 
ID6363793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp2335215 
End bp2336153 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content48% 
IMG OID642681167 
Productrestriction endonuclease 
Protein accessionYP_001955901 
Protein GI189440820 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.89806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTC CCAGATATGA CGAGTTTTTC GTTCCGATGC TTCGCATTCT CTCTGATGGC 
AAGATTCATG CATCTGGTGA GATGCTAACG TTACTTGCTG ATGAGTTTGC AGTGACAGAA
GGAGAACGCA GCCGTCTGCT ACCTAGCGGC CGTTCGCGTG TCCTCAATGG CCGCATTAGT
TGGGCTAGAA CGTACCTTAA GAAAGCCGGA CTCATAGAAA GTCCCAAACG TGGTACATAT
CGCATAACGA GACCCGGCAA AGAGGCCCTT GCTTCGGGTG CGCAGATAGA TAATGATTAT
CTGGAACGTT ATGAGTCATT CCGGTCTTTC AAGAATCTGA ATGGTGATTC TTCGACGCAT
ACGACGGTCG ATGGCGGCCT GGAGAAGAAA AGCGAAGCTT ATTCGTCCGA GGAAACTCCA
GATGAGGCAC TTGACCGTGC ATTCTCATCA ATCAACATGC GGCTTGCCGA TGACTTGCTC
TCAGAGGTGC TCAAGCTCTC TCCGATTGCG TTTGAACGGT TTGTTCTTGA TCTGATGGCG
AAAATGGGGT ATGGAGCTTT CGACTCCGCA AGCCAGATGA CGCCAATCTC GGGGGACGAA
GGCATAGATG GAATCATCAT GGAAGACAAG CTTGGTTTTG ATCTGATTTA TGTTCAGGCC
AAACGTTATG CCGAAGATAA ATCCGTTGGC AGACCAGATA TTCAAGCATT CGTAGGTGCT
ATTACTGGGC GCGGAGGCAA AGGGCTGTTT GTCACCACTG CAAGATTCAC GGAAAAGGCG
ATTACCTATG CGAAGAGGCA GCACATCATT CTTATTGATG GGCATAAGCT TGCGCAACTG
ATGATTGAAC ATGGATTCGG TGTCAGCACG CGGAAGATTT ACGAAATCAA AGCCGTGGAC
AGTGACGTTT TCAATGAATA CGTTGATGAA GAGGAATGA
 
Protein sequence
MTIPRYDEFF VPMLRILSDG KIHASGEMLT LLADEFAVTE GERSRLLPSG RSRVLNGRIS 
WARTYLKKAG LIESPKRGTY RITRPGKEAL ASGAQIDNDY LERYESFRSF KNLNGDSSTH
TTVDGGLEKK SEAYSSEETP DEALDRAFSS INMRLADDLL SEVLKLSPIA FERFVLDLMA
KMGYGAFDSA SQMTPISGDE GIDGIIMEDK LGFDLIYVQA KRYAEDKSVG RPDIQAFVGA
ITGRGGKGLF VTTARFTEKA ITYAKRQHII LIDGHKLAQL MIEHGFGVST RKIYEIKAVD
SDVFNEYVDE EE