Gene BLD_1924 details

Gene Information

• Locus tag: BLD_1924
• Symbol: mscL
• ID: 6364576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 2289606
• End bp: 2290112
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642681133
• Product: Large-conductance mechanosensitive channel
• Protein accession: YP_001955867
• Protein GI: 189440786
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.79206
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGCC ACAATCCCAT GAATATTGCC GCCGACTTTG CCAAGGCCAC GGGAGGAACC 
GCTCGCAAAG TTGTTGCTTT GACTGATAAA GGTCCGTTGA ATGGCTTTAA GAAATTCCTG 
TCGCGCGGAT CAATGATTGA TATGGCGGTA GGTGTGGTGA TGGGCTCTGC CGTTACCGCT 
GTGGTCAATT CCATCGTAGA CAATCTCATC AGCCCATTAA TTGGCATGAT CGGCGGCGTA 
CCGGATCTTT CCGGACTACT GACCATCACG TTCAACAACT CGACCGTTTC GTTTGGTGCG 
ATTCTTAATG CGCTGATTAA CTTCCTGCTT GTTGGCGTGG CGGTGTATTT CTGCGTGATT 
CTGCCGATTA ATAAGCTTCG TGATCTTACT GCTATCCAGG ATGAGGCTGA CGCTGAAGAA 
CAGGGGCCTA GCGTTGAAGA GCAGACTCTC GCCACGTTGC AGGAGATTCG CGACGAGCTG 
AAAAAGGCCA ATGACTCCGC CGAGTAA 

 

Protein sequence

MNSHNPMNIA ADFAKATGGT ARKVVALTDK GPLNGFKKFL SRGSMIDMAV GVVMGSAVTA 
VVNSIVDNLI SPLIGMIGGV PDLSGLLTIT FNNSTVSFGA ILNALINFLL VGVAVYFCVI 
LPINKLRDLT AIQDEADAEE QGPSVEEQTL ATLQEIRDEL KKANDSAE