| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1878 |
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| Symbol | xynB4 |
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| ID | 6362745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2232325 |
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| End bp | 2233944 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642681085 |
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| Product | beta-xylosidase |
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| Protein accession | YP_001955821 |
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| Protein GI | 189440740 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCT CCAATCCCGT ACTCCCCGGA TTCAACGCAG ATCCCTCGAT GATTCGCGTC
GGCGACACCT ACTACATCGC CAATTCCACA TTTGACTGGT GGCCGGGAGT CCGTTTGCAC
GAATCCCGCG ACATGGTTCA CTGGAATCTG CTGCCCGGGC CCTTAAACCG CGTTTCCCAG
TTGGACATGA AGGGCAACCC GTCTGGCGGC GGCATCTGGG CGCCTGACCT GTCCTACGCG
GACGGCAAAT TCTGGCTCAT CTACACGGAT GTGAAGATCG TCAACGGCGC GTTCAAGGAT
TGCGCGAACT ATCTGGTCAC TGCCGAGGAC ATCCGCGGCC CGTGGAGCGA GCCAATCCGT
GTCAATGGCG TGGGCTTCGA CGCCAGCCTG TTCCATGATA CCGATGGACG CAAGTATCTG
GTGCAGCAAA CCTGGGACTT CCGTGAATAT CATCATCCGT TCGACGGCAT CACCTTGACT
GAATTCGATG TCAAGACCAT GCAATTGAAG CCGGAAACAG CCCGCACCAT CTGGCGCGGC
ACCGATGTGA AATTAGTCGA AGGGCCGCAC CTCTACACCA TCAATGGCTG GTACTACCTG
TTTTGTGCGG AAGGCGGCAC CCAATACGAG CATCAGGAGT CCGTGGCCCG TTCGCGAACC
TTGGATGAGC TTTCGTTCGA AAGCATGCCG AGCAATCCGT TCATCTCCAA CTTCGATACC
CCCGGCACCT ACCTGCAAAA GCAGGGGCAT GGAGCACTCG TGGATACGCC CGGCGGCGAA
TGGTATTACG CTTCACTGTG CGGCAGGCCC TGGCGGCACG AGAACGAGCC GGCTCATGGC
GTGCGCGGCT GGTGCACGCT CGGCCGAGAG ACTTCGATTC AGAAGGTCGA GTGGGATGGC
GATGGCTGGC CGTATGTGGT CGGCGGCCAT GGGGGAGAGC GTTATGTCGA AGCCCCGGCC
GACGCCATCG CAACTGAGGC CCCTACGGAT CATAGCCAGC ATGACGAGTT CGAATCGAGC
GAACTCGACC TCAACTGGAA CACCCTGCGT GTGCCATTCA CCGAGACCAT GGGCCGCGTG
GGCGGCGGCT CGCTGACCTT GCGTGGTCAA GGGTCGCTGG CAAACCTGTT TGAACTGTCG
CTGGTAGGAC GCCGTTGGCA GGCGTTCGAT TTCAACGCCG AAACCAAGGT GACGTTCGAG
CCGAGCAACT ACATGCAGAT GGCCGGCCTG ACCAACTTCT ACAACCACCT GTGCTGGTCA
TGGGCATTCA TCACCTGGGA CGAGAAGCGA GGGCAGCGCG TAATCGAAGT CGCCCAGAAC
GATTTCGATA CGTACACGTC GTTCCTCAAA GACACAGCCA TCGCCATTCC TGATGACATC
GAATCCGTAT GGTTGCGAAC CAAAGTGCGT ACTCGTACCT ACACCTACGA GTATTCGTTC
GATGGCAAGA CATGGCATGA GATTCCGGTG ACGCTGGACG CCGCCGTGCT CTCCGATGAT
CATGTGGCCC AACGTTATGG CGGATTCTTT ACCGGCGCGT TCGTCGGGTT GGTGGCCGTG
GACCTTTCCG GATACGGCAA AGAAGCCATT TTCAGCCATT TCGATTACAT GGAAATATGA
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| Protein sequence | MKISNPVLPG FNADPSMIRV GDTYYIANST FDWWPGVRLH ESRDMVHWNL LPGPLNRVSQ
LDMKGNPSGG GIWAPDLSYA DGKFWLIYTD VKIVNGAFKD CANYLVTAED IRGPWSEPIR
VNGVGFDASL FHDTDGRKYL VQQTWDFREY HHPFDGITLT EFDVKTMQLK PETARTIWRG
TDVKLVEGPH LYTINGWYYL FCAEGGTQYE HQESVARSRT LDELSFESMP SNPFISNFDT
PGTYLQKQGH GALVDTPGGE WYYASLCGRP WRHENEPAHG VRGWCTLGRE TSIQKVEWDG
DGWPYVVGGH GGERYVEAPA DAIATEAPTD HSQHDEFESS ELDLNWNTLR VPFTETMGRV
GGGSLTLRGQ GSLANLFELS LVGRRWQAFD FNAETKVTFE PSNYMQMAGL TNFYNHLCWS
WAFITWDEKR GQRVIEVAQN DFDTYTSFLK DTAIAIPDDI ESVWLRTKVR TRTYTYEYSF
DGKTWHEIPV TLDAAVLSDD HVAQRYGGFF TGAFVGLVAV DLSGYGKEAI FSHFDYMEI
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