Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1795 |
Symbol | xerC5 |
ID | 6364615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2143286 |
End bp | 2144509 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642680998 |
Product | Integrase |
Protein accession | YP_001955738 |
Protein GI | 189440657 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAGCGCC GGAGCAAGTT CGGCACCGTG ACGCCGCGTT ATGATGCGTC GGGCGATCTT GTCGCTTGGC AGGTGCGATA CCCGGACCCG AAGCGTCCGG GCAAAAAGGT CCAGCGTCAG TTCAAACCGG ATATGGAGCA CGAAGCGCAC CAGTGGCTCG AAGAGGAGCG ACACCTGGTC GAACTGGACC GCAAGAACAT CCAGGAATGG GTTCACCCGT CCGAACGCCG TCGCAGGAAG CGCACGAGCC TTATCTCGTT CGAGGATTAC GTGACCCAGT GGGCGGAGGA ATACCGTTTG CCGAACGGTG AGAGGATAGC CGGAGGTACG CTCCGCAATC TGAATCTCGA TATTGCGCAT TTCATGCCGG GCTTCAAGGG CAAAATTCTG GCCGAGATCA CACCGAAGGA CATCAAACGC TGGTATGACG CGCCGCACCC TGAGGGACAA TGGGCATTCC GCCGATCATG CATGCGACTG AAAGCGGCGT TCACCAGCGC CACAAAGATG AGTATGGACG GCTCTCCGCC GTTGATCCGA GACAACCCGT TCATCCTGCC CATACCGCCA GCACCGCGTT CCGCCAGAGA GGACGTTCCG CCTGTTACAC CTCTCGAACT CAGTCTGATA GCGGAGAATA TGCCCGACTA CACAAGACTG ACAGTAGTAC TCGCCACGCT CGTCGGAGGC CTCCGTTGCG GCGAGCTGTG CGGCTTGCAG GTCAAGGACA TCGATCTGAA AGCCAAACGC CTGACCGTGC GCCACTCCGT CAACAGAGGA TATTCGGATC GCGGCTCGAC GCGCATAGCT AAGACCAAGA CCGACTCCAG CCGACGCACT GTTCCCATCC CTGACGGACT TATTCCCCTG ATCCATGATC ATTTGCTCAA GCATTGCGAA TGGACGGACT CTGAAGCTAT GGTGTTTCGG CCTAAACGTG CTGTGGTGAT GAGCCAGACC ACCCTGGAAG GCCAGTTCCG CAAAGCTAGG GAGAAGGCCG GACGTACCGA TCTGACCTTC CAATCACTGA GAGCGAGCCA CGCGACGCTG CTCATGCTCA AGGGAGGCAC TCTGAGGGAA GTTATGGACG AACTTGGCCA CGTTAGCGAG AAAGTCGCTA TCAAGCACTA CCAGCGTATC GTCGCCCAGC ATCGCAGCCA GGTCATCAAT CAACTTGCCG AAGACTTTAT CAAAGCAGCT GTCGTATATG AAGAGCATGA ATGA
|
Protein sequence | MERRSKFGTV TPRYDASGDL VAWQVRYPDP KRPGKKVQRQ FKPDMEHEAH QWLEEERHLV ELDRKNIQEW VHPSERRRRK RTSLISFEDY VTQWAEEYRL PNGERIAGGT LRNLNLDIAH FMPGFKGKIL AEITPKDIKR WYDAPHPEGQ WAFRRSCMRL KAAFTSATKM SMDGSPPLIR DNPFILPIPP APRSAREDVP PVTPLELSLI AENMPDYTRL TVVLATLVGG LRCGELCGLQ VKDIDLKAKR LTVRHSVNRG YSDRGSTRIA KTKTDSSRRT VPIPDGLIPL IHDHLLKHCE WTDSEAMVFR PKRAVVMSQT TLEGQFRKAR EKAGRTDLTF QSLRASHATL LMLKGGTLRE VMDELGHVSE KVAIKHYQRI VAQHRSQVIN QLAEDFIKAA VVYEEHE
|
| |