| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1664 |
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| Symbol | pnp |
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| ID | 6364558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2003064 |
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| End bp | 2005805 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642680860 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001955607 |
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| Protein GI | 189440526 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.123997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGTC CCGAAATCAA GGCCGTTGAG GCCGTAATCG ACAATGGATC GTTTGGCAAG
CGCACGCTGC GCTTCGAGAC CGGCCGCCTC GCCCAGCAGG CCGATGGCGC TGTGGCCGCC
TACCTCGACG ACGATTCCAT GATTCTGTCC ACCACCACCG CCGGTTCCAG CCCGAAGGAG
AACTACGACT TCTTCCCGCT GACCGTCGAT GTTGAAGAGA AGATGTACGC TGCCGGCAAG
ATTCCGGGCT CGTTCTTCCG CCGTGAAGGC CGCCCGAGCT CCGAGGCCAT CCTCGCCTGC
CGCATCATCG ACCGCCCGCT GCGCCCGCTG TTCCCGCACA CCCTGCGCAA CGAAGTGCAG
GTCGTCGAGA CCGTGCTCGC CGTGAACCCT GATGACGCTT ACGATGTCAT CGCCCTGAAC
GCCGCTTCCG CCTCCACTAT GATCTCCGGC CTGCCGTTCG AAGGCCCGGT CTCCGGTGTG
CGTCTGGCGC TGATTGATGG CCAGTGGGTT GCCTTCCCGC GTTGGAGCGA GCGTGAGCGC
GCCGTGTTCG AGATTGTGGT CGCTGGCCGC GTGATCGAGA ACGGTGATGT TGCCATCGCC
ATGATCGAGG CCGGTGCCGG CAAGAACGCC TGGCACCTCA TCTACGACGA GGGTCAGACC
AAGCCCGATG AGGAAGTCGT TGCCGGTGGT CTTGAGGCCG CCAAGCCGTT CATCAAGGTG
ATTTGCGAGG CTCAGGACGA GCTCAAGAAG ATCGCCGCCA AGGAGACCAA GGAATTCCAG
CTCTTCCCGG AGTACACCGA CGAGCTGTAC GCCCGCATCG ACGAGATCGC TCACAAGGAT
CTGGACGAGG CCCTCTCCAT CGCCGAGAAG CTGCCGCGCC AGGACCGCAT CCACGAGATC
AAGGAGCACG TGCGCGAGGT GCTCGCGGAC GAGTTCACCG ATATGGACGA TGCCGAGAAG
GACAAGGAAC TCGGTAACGC CTTCAAGGAA CTGCAGCGCC AGATTGTGCG TCGCCGCATC
CTGACCGAGG ACTACCGCAT CGACGGCCGT GGCCTGCGCG ACATCCGCAC CCTGTCCGCC
GAGGTGGACA TTGTGCCTCG CGTGCACGGT TCCGCCCTGT TCCAGCGTGG CGAGACCCAG
ATTCTGGGCG TCACCACGCT GAACATGCTC AAGATGGAGC AGCAGATCGA CGCGCTGTCC
GGTCCGCAGT CCAAGCGTTA CATGCACAAC TACGAGATGC CGCCGTACTC CACTGGTGAG
ACCGGCCGCG TCGGTTCCCC GAAGCGCCGC GAAATCGGCC ACGGCGCCCT CGCCGAGAAG
GCTCTCGTGC CGGTGCTGCC GAGCCGCGAA GAGTTCCCCT ACGCCATCCG ACAGGTCTCC
GAGGCCATCG GTTCCAACGG TTCCACTTCG ATGGGTTCCG TGTGCGCCTC CACGCTGAGC
CTTTTGGCTG CCGGCGTGCC GCTGAAGGCT CCGGTTGCCG GCATCGCCAT GGGCCTCGTG
TCCGGCGACG TTGATGGCAA GCACATCTTC AAGACCCTCA CCGATATTCT GGGTGCCGAG
GATGCCTTCG GCGACATGGA CTTCAAGGTG GCCGGTACTT CCGAGTTCAT CACCGCCCTG
CAGCTCGACA CCAAGCTCGA CGGCATCCCC GCCGACATCC TGGCCGCCGC TCTGCAGCAG
GCCAAGGAAG CCCGCGCCAC GATTCTCGAG GTCATCAACG AGTGCATCGA CGGCCCGGCC
GAGATGAGCG AGTTCGCTCC GCGCATCATC ACCACCTCCG TCCCGGTTGA GAAGATCGGC
GAAGTCATCG GCCCGAAGGG CAAGATGATC AACCAGATTC AGGAAGACAC CGGCGCTGAA
ATTGCCATCG AGGATGACGG TACCGTCTTC ATCTCCTCCG AGGGTGGCGA GGCTGCTGAG
AAGGCCAAGG CCATCATCGA CCAGATTGCC AACCCGCACG TGCCCGAGGC CGGCGAAACC
TACAACGGCA AGGTCGTCAA GACCACGTCG TTCGGCGCTT TCGTGAACCT CACCCCCGGC
ACCGACGGCC TGCTGCACAT CTCCCAGATC CGCAACCTGG CCAACGGCGA GCGTATTGAC
GCTGTCGAAG ACGTGCTCAA GGAAGGCGAC ACCGTTGAGG TGATCGTTCA GGGTGTCGAT
GATCGCGGCA AGATCTCCCT GGCCATTCCT GGTTTCGAGG ATCAGGAGAA CAACGCCCGC
CCGAGCCGTG GCGATCGCGA TGACCGCCGT GGCGGCCGTG GCCGTGGTGA CCGTGACGAT
CGCCGTGGCG GCCGTGGCCG TCGCTCCGAG CGCGATGACC GTGACTTCGA CGATCGTGAC
GACCGTCCGC GTCGCCGTCG CTCCGATGAC TTCGAGGATG ATTACGACGA CCGTCCGCGT
CGCCGTCGCT CCGATGACCG TGACTTCGAT CGCGATGATC GCGATGATGA TCGTCCGCGT
CGCCGTCGTT CTGCCGACCG TGACTTCGAC GATCGCGATG ACCGTGATGC TCGCGACTCC
CGTGACGATG ATCGTCCGCG TCGCCGTCGC TCTTCCGATC GCGATGACCG TGGCGATCGT
GATGACCGCC GTGGCGGTTC CCGTGGCCGT GGCCGTGGCT CGGACCGTAA CCCGCGCTAC
GCCACCGACG ACAACTACGA CGACTACCGC GCCGACCGCG AAGAGCGTAC TGAGCGCCCG
CGTCGCCGCG TCCGTCGCGA CTTTGATCCG TTCGAGGACT AA
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| Protein sequence | MEGPEIKAVE AVIDNGSFGK RTLRFETGRL AQQADGAVAA YLDDDSMILS TTTAGSSPKE
NYDFFPLTVD VEEKMYAAGK IPGSFFRREG RPSSEAILAC RIIDRPLRPL FPHTLRNEVQ
VVETVLAVNP DDAYDVIALN AASASTMISG LPFEGPVSGV RLALIDGQWV AFPRWSERER
AVFEIVVAGR VIENGDVAIA MIEAGAGKNA WHLIYDEGQT KPDEEVVAGG LEAAKPFIKV
ICEAQDELKK IAAKETKEFQ LFPEYTDELY ARIDEIAHKD LDEALSIAEK LPRQDRIHEI
KEHVREVLAD EFTDMDDAEK DKELGNAFKE LQRQIVRRRI LTEDYRIDGR GLRDIRTLSA
EVDIVPRVHG SALFQRGETQ ILGVTTLNML KMEQQIDALS GPQSKRYMHN YEMPPYSTGE
TGRVGSPKRR EIGHGALAEK ALVPVLPSRE EFPYAIRQVS EAIGSNGSTS MGSVCASTLS
LLAAGVPLKA PVAGIAMGLV SGDVDGKHIF KTLTDILGAE DAFGDMDFKV AGTSEFITAL
QLDTKLDGIP ADILAAALQQ AKEARATILE VINECIDGPA EMSEFAPRII TTSVPVEKIG
EVIGPKGKMI NQIQEDTGAE IAIEDDGTVF ISSEGGEAAE KAKAIIDQIA NPHVPEAGET
YNGKVVKTTS FGAFVNLTPG TDGLLHISQI RNLANGERID AVEDVLKEGD TVEVIVQGVD
DRGKISLAIP GFEDQENNAR PSRGDRDDRR GGRGRGDRDD RRGGRGRRSE RDDRDFDDRD
DRPRRRRSDD FEDDYDDRPR RRRSDDRDFD RDDRDDDRPR RRRSADRDFD DRDDRDARDS
RDDDRPRRRR SSDRDDRGDR DDRRGGSRGR GRGSDRNPRY ATDDNYDDYR ADREERTERP
RRRVRRDFDP FED
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