| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1585 |
|---|
| Symbol | clpA2 |
|---|
| ID | 6363832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1888542 |
|---|
| End bp | 1891211 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642680776 |
|---|
| Product | ATP-binding subunit of Clp protease |
|---|
| Protein accession | YP_001955528 |
|---|
| Protein GI | 189440447 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGA AGTTCACCAC TATGGCCCAA GAAGCCGTCG GCGACGCGAT TCAGAGTGCG
TCCGCCGCAG GAAACGCGCA GGTCGAGACC CTGCACGTCA TGGATGCGCT GCTGCGCCAG
GAAAACGGCG TGGCGCGCTC TCTGATCGAG GCCGCGGGCG GGGACCCGCA GGCCATCGGC
GCGGCGGTGC GCAACGCTTT GGTCGCGCTG CCGAGCGCAT CCGGATCCAG CACCTCGCAG
CCACAGGCCA GCCGCCAGCT GACCGCCGCC ATCGCCCAGG CTGAGAAGGA AATGCAGCAG
ATGGGCGACG AATACGTCTC CACCGAACAT CTGCTTATCG GCATCGCGGC CAGCAAGCCG
AACCAGTCGG CCGAAATCTT GGAGAAGAAC GGCGTCACCG CAGCCTCCCT GCGCAAGGCC
GTACCCGGCG TGCGTGGTGG CGCGAAGGTC ACCAGCCCGG ACGCGGAAGG CTCGTACAAG
GCCCTAGAGA AGTACTCCAC CGACCTGACG GCCGCCGCCA AGGAAGGCAA GCTGGACCCG
GTCATCGGAC GTGACCAGGA AATCCGCCGC GTGATTCAGA TCCTCTCCCG TCGTACCAAG
AACAACCCGG TGCTGATCGG CGAGCCCGGC GTCGGCAAGA CCGCCGTCGT GGAAGGCCTG
GCCCAGCGTA TCGTGGCGGG CGACGTGCCC ACCACCCTGC AAGGCAAGAA GCTCATCTCC
CTTGACCTAG GCTCCATGGT GGCCGGTTCG AAGTACCGTG GCGAGTTCGA GGAGCGCCTG
AAGAGCGTCC TGAACGAAAT CAAGAATGCG GATGGTCAGA TCATCACCTT CATCGACGAG
ATCCACACCA TCGTCGGCGC GGGTGCGGCC GAAGGCTCGA TGGACGCCGG CAATATGTTG
AAGCCCATGC TGGCCCGTGG CGAGCTGCGC CTGATCGGCG CGACCACGCT GGACGAGTAC
CGCGAGAACA TCGAAAAGGA TCCGGCATTG GAACGCCGTT TCCAACAGGT GTTCGTGGGC
GAGCCGAGCG TGGAAGACAC CATCGCCATC CTGCGTGGCC TGAAGCAGCG TTACGAGGCG
CACCATAAGG TAACGATCGG CGACGACGCG CTGGTCGCCG CCGCGACCCT CTCGAACCGG
TACATCTCAG GCCGTCAGCT GCCGGACAAG GCCATCGACC TGGTCGATGA GGCGGCCGCT
CACCTGCGTA TGGAGCTCGA CTCCTCGCCT GAGGAGATCG ATGAGCTGCA GCGCAAGGTG
ACCCGTCTTG AAATGGAGGA AATGCAGCTC AAGAAGGCCG AGGATCCTGC GTCCAAGGAG
CGTCTGGGCA AGCTGCAAGC CGAACTTGCG GACACCCGTG AGAAGCTCAG CGGTCTCAAG
GCGCGTTGGG ATGCGGAACA GGCTGGCCAC AACAAGGTCG GCGACCTGCG TGCCAAGCTC
GACGACCTGC GCGTGCAGGC GGATAAGTAT ACCCGTGAAG GCAACTTGGC GGAGGCCTCG
AAGATTCTGT ACGGCGAGAT TCCGTCCATT CAGAAGGAGC TTGCCGCCGC GGAGAGCGCG
GATGCTGAAT CTGCTGATGC CAGCGCGGCC AACCCGGCCG ATGAGCCGAT GGTCCCGGAC
CGTGTGGACG CCGACTCGGT GGCTGAGATC GTCTCCGACT GGACCGGCAT TCCCGTCGGC
CGCCTGATGC AGGGCGAAAA CGAGAAGCTG CTGCACATGG AGGACTACCT CGGCAAGCGT
GTGATCGGCC AGAAGGAAGC CATCGCCGCC GTGTCCGACG CGGTGCGCCG TTCGCGTGCC
GGCATCTCCG ACCCGAACCG TCCGACCGGA TCGTTCCTGT TCCTCGGCCC CACCGGTGTG
GGCAAGACCG AACTGGCCAA GGCGCTCGCC GACTTCCTGT TCGACGACGA GAAGGCCATG
GTCCGCATCG ACATGTCCGA ATACATGGAG AAGGCTTCGG TCTCGCGCCT GATTGGCGCG
GCGCCGGGCT ACGTGGGCTA CGAGCAGGGC GGCCAGCTGA CCGAGGCCGT GCGCCGTCGC
CCGTATTCCG TGGTGCTGTT CGACGAGGTC GAGAAGGCCA ACCCGGAGAT CTTCGACGTG
CTGCTGCAGG TACTTGACGA TGGTCGCCTG ACCGATGGCC AGGGAAGGAC CGTGGACTTC
AAGAACACGA TCCTGATTAT GACCTCTAAC CTCGGCTCGC AGTTCCTCGT GAACGAGGAC
ATGGACGCCG ACGCCAAGAA AAAGGCCGTG ATGGACGCTG TCCACATGAA CTTCAAGCCG
GAGTTCCTGA ACCGTCTGGA CGACATCGTC ATGTTCCACC CGCTTACGCG CGAGGAGCTT
GGCGGCATCG TGGATATCCA GGTGGCTGGC GTGTCCCAGC GTCTGACCGA TCGCCGCATC
ACGCTGGACG TCACCGACTC GGCTCGCGAA TGGCTTGCCA ACACCGGTTA CGACCCGGCT
TATGGCGCTC GTCCGCTGCG CCGCCTGGTA CAGACCGAAG TGGGCGACCA GCTGGCCCGT
ATGCTGCTGG CCGGCAAGGT CCACGACGGT GACACCGTGC TCGTCGACCA GACCGGCGGC
GAACATCTGG AGCTCTCCGC TTGGGCGAGC GACCAGATTG TCTCCGACAA TCCGGACGTG
AGCGTGGACA ACGTCACCGA AGACAAGTGA
|
|---|
| Protein sequence | MEQKFTTMAQ EAVGDAIQSA SAAGNAQVET LHVMDALLRQ ENGVARSLIE AAGGDPQAIG
AAVRNALVAL PSASGSSTSQ PQASRQLTAA IAQAEKEMQQ MGDEYVSTEH LLIGIAASKP
NQSAEILEKN GVTAASLRKA VPGVRGGAKV TSPDAEGSYK ALEKYSTDLT AAAKEGKLDP
VIGRDQEIRR VIQILSRRTK NNPVLIGEPG VGKTAVVEGL AQRIVAGDVP TTLQGKKLIS
LDLGSMVAGS KYRGEFEERL KSVLNEIKNA DGQIITFIDE IHTIVGAGAA EGSMDAGNML
KPMLARGELR LIGATTLDEY RENIEKDPAL ERRFQQVFVG EPSVEDTIAI LRGLKQRYEA
HHKVTIGDDA LVAAATLSNR YISGRQLPDK AIDLVDEAAA HLRMELDSSP EEIDELQRKV
TRLEMEEMQL KKAEDPASKE RLGKLQAELA DTREKLSGLK ARWDAEQAGH NKVGDLRAKL
DDLRVQADKY TREGNLAEAS KILYGEIPSI QKELAAAESA DAESADASAA NPADEPMVPD
RVDADSVAEI VSDWTGIPVG RLMQGENEKL LHMEDYLGKR VIGQKEAIAA VSDAVRRSRA
GISDPNRPTG SFLFLGPTGV GKTELAKALA DFLFDDEKAM VRIDMSEYME KASVSRLIGA
APGYVGYEQG GQLTEAVRRR PYSVVLFDEV EKANPEIFDV LLQVLDDGRL TDGQGRTVDF
KNTILIMTSN LGSQFLVNED MDADAKKKAV MDAVHMNFKP EFLNRLDDIV MFHPLTREEL
GGIVDIQVAG VSQRLTDRRI TLDVTDSARE WLANTGYDPA YGARPLRRLV QTEVGDQLAR
MLLAGKVHDG DTVLVDQTGG EHLELSAWAS DQIVSDNPDV SVDNVTEDK
|
|---|
| |