Gene BLD_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1547 
Symbol 
ID6364362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1840000 
End bp1841034 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID642680738 
Productputative beta-xylosidase 
Protein accessionYP_001955490 
Protein GI189440409 
COG category[R] General function prediction only 
COG ID[COG3940] Predicted beta-xylosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000631807 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTT ACAACAATCC GATCGTGCTC CAGCGTGCGG ATCCGTGGGT GCTTAAGGTC 
GACGGCGAAT ACTGGTTCAC CGCATCCGAT CCCGAGTACG ACAAGATTGC CATCCGTCAC
GCCTCGACGA TCAACGACCT GCAGAAGGCC CCGGAGACCG TGGTCTGGCG CAAGCATGAG
TCCGGCGTAT GCAGCAAGTA CATCTGGGCT CCTGAGCTGC ACCGCGTGAA CGGCGCGTGG
TACATCTACT TCGCCGGCGC GGAACACGAG TTCGAGCCGA ACGGCATGCC CACCCACCGC
ATGTTCGTGC TGGAGAACAC CGATGCCGAC CCGACCACCG ACAACTGGGT CGAGAAGGGC
CAGATCGTCA CGCCGATGGA CTCGTTCTCG CTCGACGCGA CCACCGAGGT GATCGACGGC
GTGCAGTACC TCGTCTGGGC GCAGAAGGAC TACGACATCC CCGGCAACTC CAACCTGTAC
ATCGCTCCGA TGGCGAACCC GTGGACGCTG GCCGCTGATC CGGTGATGCT CACCAAGCCC
GAGTATGACT GGGAGTGCAT CGACTTCCTC GTCAACGAAG GTCCGGCGTT CCTGTTCCAC
GACGACAAGA TCTTCATCAC GTACTCTGCG TCCGGCACCG GCGTGCCGTA TGCGGTGGGC
CTGCTGACCG CCGACCGTGG CAGCGACCTC ATGGATCCGA AGAGCTGGAC CAAGAGCCCG
GTGCCGGTGT TCAAGACCTG CGCCGAGAAC GGCCAGTACG GCCCCGGCCA CAACTCGTTC
ACCAAGTCCG AGGATGACTC CGAGGATCTG ATGATCTACC ACGCGCGCAA CTACACCGAA
ATCAAAGGCG ATCCGCTGTT CGACCCGAAC CGTCACGCCC GTGTCGGCGT GGTGCGCTGG
AACGAGGACG GCACTCCCGA CTTCGGCGTG CCTGAGCCGG ACAACCTGTG GACGCCCGTC
ACGACCGACG TGCTGCCGCC CGACGGCGGT CCGAAAGCCG GCACCCCGGC GGTCGGGCTG
GCCGCAGAGG CATAG
 
Protein sequence
MTVYNNPIVL QRADPWVLKV DGEYWFTASD PEYDKIAIRH ASTINDLQKA PETVVWRKHE 
SGVCSKYIWA PELHRVNGAW YIYFAGAEHE FEPNGMPTHR MFVLENTDAD PTTDNWVEKG
QIVTPMDSFS LDATTEVIDG VQYLVWAQKD YDIPGNSNLY IAPMANPWTL AADPVMLTKP
EYDWECIDFL VNEGPAFLFH DDKIFITYSA SGTGVPYAVG LLTADRGSDL MDPKSWTKSP
VPVFKTCAEN GQYGPGHNSF TKSEDDSEDL MIYHARNYTE IKGDPLFDPN RHARVGVVRW
NEDGTPDFGV PEPDNLWTPV TTDVLPPDGG PKAGTPAVGL AAEA