Gene BLD_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1485 
Symbol 
ID6363722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1735937 
End bp1737226 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID642680672 
ProductMalE-type ABC sugar transport system periplasmic component 
Protein accessionYP_001955428 
Protein GI189440347 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCCG ATTCCCCACA TGCAACGCCT AGACTGAAGC GTCTGGCCGT GCGCACCGCC 
GCCGTGGTGT GCGCGATCGC CGTCGGCTTC GGCCTGGCAG GCTGCGGCTC CAGCACCGCA
GGCACCGTCA CGCTGGATTT CTTCCAGTTC AAGTCCGAGG CCGCCGACCA GTTCAAGTCC
ATGGTCGCCG ACTTTGAGAA GCAGAACCCG ACCATCAAGG TCAACATCAA CAACTCCGCC
AACGCCCAGA CCGATCTGCG CACCCGTTTC GTCAAGAATC GTGTGCCGGA CGTGATTACC
TTCAACGGCG ACATCAGCTT CGGCAACTTC GCTGCCTCCG GTGTGTTCTA CGACTTCACC
GACGAACCCA TCGTGGACAC CCTCAACCCC GGCATGGTGC AGATTGCCAA GAATCTGGTG
CAGACCACCG ATTCCTCCAA GAAGCGCCTG TACGGCCTGC CCTTCGCGGG TAACGCCTCC
GGCTACATCT ACAACAAGGC TCTGTTCCGC AAGGTTGGCC TTGACCCGGA GAACCCGCCG
ACCACCTGGA GCGAGTTCAC CGATATGCTC AACACCTTCA AGGACGCCGG CATCAACCCG
CTGCAGGGTT CCGTGGCCGA CGCCTGGACC ACCCAGGCAC CGCTCGCCTC CCTGGCCGGC
ACGCTGGTTC CCGAATCGAA GTACACCGAG CTCAAGCAAG GCAAGACCAC GTTCCAGGAA
CTGTGGAAGA CCTCAGTCGA GAAGGAATCC GAGCTCTTCA CCTACTCCAC TGCGGACACC
GGCGTCACCT ACCAGCAGGG CACGCAGAAC TTCGCCCAAG GCAAGGCCGC GATCATCCCG
CTCGGCACCT ACGCCATCCC GCAAATCCTG CTGATCAACC CCGATATCGA ACTTGGTTTC
GCCCAGATGC CGGCCACCGA TGACGCCAGC GAGCAGATCC TCACCGCCGG CGACGACGTG
ATGCTCACCA TCGGTGCGAA CACCAAGCAC CCCAAGGAAG CGATGAAGCT CGTCGAATTC
CTCATGCAGA AGGATCAGCT TGACGCCTAC GCCGACGCCC AGTCCGCCAT CACGCCGCTG
AAGGACACCT ACTTCGGCAA CGATGCGCTG GAAACCGTGC GCCCGTTCTT CGAGGAAAAC
CGACTGGCCG ACTTCTGCGA CCACTACATT CCTTCGTCCA TCAACATCGG CGGCTACCTG
CAGACCATGG TGACCTCCGG CAACACCGAC CGTTTCCTGA ACCAGATGCA GACCGAATGG
GACAAGGTCC AAGCCAGGAC CTTCGAGTGA
 
Protein sequence
MLSDSPHATP RLKRLAVRTA AVVCAIAVGF GLAGCGSSTA GTVTLDFFQF KSEAADQFKS 
MVADFEKQNP TIKVNINNSA NAQTDLRTRF VKNRVPDVIT FNGDISFGNF AASGVFYDFT
DEPIVDTLNP GMVQIAKNLV QTTDSSKKRL YGLPFAGNAS GYIYNKALFR KVGLDPENPP
TTWSEFTDML NTFKDAGINP LQGSVADAWT TQAPLASLAG TLVPESKYTE LKQGKTTFQE
LWKTSVEKES ELFTYSTADT GVTYQQGTQN FAQGKAAIIP LGTYAIPQIL LINPDIELGF
AQMPATDDAS EQILTAGDDV MLTIGANTKH PKEAMKLVEF LMQKDQLDAY ADAQSAITPL
KDTYFGNDAL ETVRPFFEEN RLADFCDHYI PSSINIGGYL QTMVTSGNTD RFLNQMQTEW
DKVQARTFE