Gene BLD_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1434 
SymbolrecF 
ID6363159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1662804 
End bp1663991 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content57% 
IMG OID642680620 
Productrecombinational DNA repair ATPase 
Protein accessionYP_001955377 
Protein GI189440296 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGATT TCGTACCAGG CGTGAATATC CTGTTCGGCA AGAACGGTCT GGGCAAAACC 
AATCTGGTGG AAGCCGTCGA AGTGCTGTCC ACCGGATCGA GCCATCGCAC GTCCAGCACG
TTGCCGCTGA TCGAACGCGG GCAGACCACG GCCACCATCC GCGCGAACGT CGCTGATGAT
GCCGGTCAAA CCACTACGTA TGAAGCGTCA ATTCATGCGC GTGGTGCCAA CCGAGCCCGC
ATCAACTCGG GGTCGTCGCT GTATCTGCGC GATATCATCG GCAAGATTCC CAGCGTTTCC
TTCACTCCCG AAGATCAGCG GTTGGTGTCC GGCGATCCGG GAGCACGCCG CACCATGATG
AATCAGGCTG CGGCTCTGCT CGAGCCCGGA TACATGCAGA CGTTGCAACA GTTCACGCGC
ATCGCCAAAC AGCGTGCCAC ATTGTTGAAG CAATTGAATG CCAATGTCAA CAATGGCCAG
CCGATGGATG CGGTTCTGAG CGGTTTGGAA ATCTGGACCG GCCAGTTCAT CGAAGCCGGT
GTGGCGTTGA CCCGTATGCG CGCTCATGTG ATCGGTCTGC TTGCCGAGCC ATTTGCCGCG
ATTTACGCCG ACTTGGCCGG TGCCGGCGAG CAGGTGACGC TCACTTATGC GCCTTCATTC
GACGAAGTGC TGATGTTCGA CGATCCGCAT CCGCAGATTA GCGAGCATTT CCAACGCATC
TACCCCGGTG AAGTGGCTCG CGGCGTGAAC CTTATCGGTC CGCAGCGCGA TGACATGAAC
CTTGAGTTGG GCGGTATTCC CGCCCGCGAG TTCGCTTCGA ACGGCGAGAT GTGGACGATG
GCGTTGGCCT TGAAAATGGC ATTGTTCGAA ATAGTGCGTG ACCGGTTGGG ATTGCAGCCG
ATTGTGATTC TCGATGATGT GTTCGCCCAG CTTGACGACA GCCGGCGCAC GCAGATTCTT
GATTTCGCCA GAAAACAGGA TCAGGTGCTG ATTACCGTGG CCGCTGAAGG CGATGTGCCC
GACTATGAAT CGGCCCATCG CATCGACGTG GCCGCACTGG ACGAACCAGC TTCCGTGATA
TTGCCAACTC TGGGCAATTT GTCCAATTCG CGGGAAAATG AGAGTTTGGG TGGGTATGAC
GAAAAAACCG CGGTGGACAG CGCGTCCGTA GAACGGAAAG TGTCATGA
 
Protein sequence
MVDFVPGVNI LFGKNGLGKT NLVEAVEVLS TGSSHRTSST LPLIERGQTT ATIRANVADD 
AGQTTTYEAS IHARGANRAR INSGSSLYLR DIIGKIPSVS FTPEDQRLVS GDPGARRTMM
NQAAALLEPG YMQTLQQFTR IAKQRATLLK QLNANVNNGQ PMDAVLSGLE IWTGQFIEAG
VALTRMRAHV IGLLAEPFAA IYADLAGAGE QVTLTYAPSF DEVLMFDDPH PQISEHFQRI
YPGEVARGVN LIGPQRDDMN LELGGIPARE FASNGEMWTM ALALKMALFE IVRDRLGLQP
IVILDDVFAQ LDDSRRTQIL DFARKQDQVL ITVAAEGDVP DYESAHRIDV AALDEPASVI
LPTLGNLSNS RENESLGGYD EKTAVDSASV ERKVS