Gene BLD_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1385 
SymbolsrtA2 
ID6363143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1603970 
End bp1605208 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content63% 
IMG OID642680569 
Productsortase 
Protein accessionYP_001955328 
Protein GI189440247 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.70961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACACG GCAGGCACAA CAGCGGCGTA CCGGCGCCCA TTGATCTCGC GTCCGTGTCG 
GACGTACAGC CCTTCCCCGA GGACGATGCC GCACGAATGG CGGCAGACCC GGCCAACGCC
AGTAGGGCAA GGTCCCGTCG TGCCGCAGTA CGCGGCGCGT CTTCGCCCCA GCGGAGCCCG
GTCTGGCAGG CACTCGGCAT CTGCGCCGAA CTGCTGATTA CCGCTGCCGT GATTTGCGCC
CTGTACATCG TCTGGCAGAT GTGGTGGACC GGTGTCGAGG CGGAGCGAGC CCAGAACGAA
ACCACCCAGT CCGTCGACTG GAGCGACCCC AGCAACAACG GGGGAACGGT CACCATCGCC
AAAGCCCAGG AGGGCGATGC GCCGGTACAG CCGAAAGACG CGAAATATGG CGACTTGATT
GCGCAGATCT ACATTCCGCG CTTCGGCTCC CAATGGCACC GCAACATCGT GGAAGGCACC
ACGCTCGAGC AGCTCAATCG CCACGGTCTG GGCCATTACG ACACCACCCA GATGCCGGGG
CAGGTCGGCA ACTTCGCCGT CGCCGGCCAC CGCAACGGCT ACGGGCAGCC GTTGGGCGAT
GTGGACAAGT TGCAGGAAGG CGATCCCATC ATCGTTCGTA CCAAGGATTA CTGGTACGTC
TACCACTACA CCCGGTACGA GATTGTGCTG CCCACGGACG TGCATGTGAT CGCCCCCAAT
CCGGAAGACT CCACTGCCAA TCCCACCAAA CGCATGATCA CACTGACCAC CTGTGAGCCG
AAATACTCCA CCCCCACCCA TCGATGGATC AGCTATGGTG AGTTGGCGTA CTGGGCCAAA
GTGTCCGACG GTGTGCCCAA AGAGCTGGCT ACTACTGATT CGTCCGGTGC AGTGATGTTC
TCCACCACCG AAACCCCCTC GATCGCTTCC CGCATTGGCT CGCTGGACAA GGTGGTATTC
GGCGCGCTGG TAGTGTGGCT GGTTCTGTTC ATTGCCGCTG CGGTGGCATG GCGCTGGCCG
GTGCTGCGCG AGATTCGCGC GGGTGAGCGT CGCCGTCCGG ATGCCAGCAT CTATGGCGGA
CTGTTGCGTC TGCAGCCCGG CGTGGCACCG ATTCGATGGT TGCTGCTGGC TCTGCTGCTG
TTCGCAGCCG CCGCGGCGCT GTTCCAGTGG GGATTCCCTT GGGCCGCCGC CAATATCCCA
TTCCTACAGC AGATGTCGAA CTTCGTGGCA GCGAGCTGA
 
Protein sequence
MRHGRHNSGV PAPIDLASVS DVQPFPEDDA ARMAADPANA SRARSRRAAV RGASSPQRSP 
VWQALGICAE LLITAAVICA LYIVWQMWWT GVEAERAQNE TTQSVDWSDP SNNGGTVTIA
KAQEGDAPVQ PKDAKYGDLI AQIYIPRFGS QWHRNIVEGT TLEQLNRHGL GHYDTTQMPG
QVGNFAVAGH RNGYGQPLGD VDKLQEGDPI IVRTKDYWYV YHYTRYEIVL PTDVHVIAPN
PEDSTANPTK RMITLTTCEP KYSTPTHRWI SYGELAYWAK VSDGVPKELA TTDSSGAVMF
STTETPSIAS RIGSLDKVVF GALVVWLVLF IAAAVAWRWP VLREIRAGER RRPDASIYGG
LLRLQPGVAP IRWLLLALLL FAAAAALFQW GFPWAAANIP FLQQMSNFVA AS