Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1385 |
Symbol | srtA2 |
ID | 6363143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1603970 |
End bp | 1605208 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642680569 |
Product | sortase |
Protein accession | YP_001955328 |
Protein GI | 189440247 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.70961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACACG GCAGGCACAA CAGCGGCGTA CCGGCGCCCA TTGATCTCGC GTCCGTGTCG GACGTACAGC CCTTCCCCGA GGACGATGCC GCACGAATGG CGGCAGACCC GGCCAACGCC AGTAGGGCAA GGTCCCGTCG TGCCGCAGTA CGCGGCGCGT CTTCGCCCCA GCGGAGCCCG GTCTGGCAGG CACTCGGCAT CTGCGCCGAA CTGCTGATTA CCGCTGCCGT GATTTGCGCC CTGTACATCG TCTGGCAGAT GTGGTGGACC GGTGTCGAGG CGGAGCGAGC CCAGAACGAA ACCACCCAGT CCGTCGACTG GAGCGACCCC AGCAACAACG GGGGAACGGT CACCATCGCC AAAGCCCAGG AGGGCGATGC GCCGGTACAG CCGAAAGACG CGAAATATGG CGACTTGATT GCGCAGATCT ACATTCCGCG CTTCGGCTCC CAATGGCACC GCAACATCGT GGAAGGCACC ACGCTCGAGC AGCTCAATCG CCACGGTCTG GGCCATTACG ACACCACCCA GATGCCGGGG CAGGTCGGCA ACTTCGCCGT CGCCGGCCAC CGCAACGGCT ACGGGCAGCC GTTGGGCGAT GTGGACAAGT TGCAGGAAGG CGATCCCATC ATCGTTCGTA CCAAGGATTA CTGGTACGTC TACCACTACA CCCGGTACGA GATTGTGCTG CCCACGGACG TGCATGTGAT CGCCCCCAAT CCGGAAGACT CCACTGCCAA TCCCACCAAA CGCATGATCA CACTGACCAC CTGTGAGCCG AAATACTCCA CCCCCACCCA TCGATGGATC AGCTATGGTG AGTTGGCGTA CTGGGCCAAA GTGTCCGACG GTGTGCCCAA AGAGCTGGCT ACTACTGATT CGTCCGGTGC AGTGATGTTC TCCACCACCG AAACCCCCTC GATCGCTTCC CGCATTGGCT CGCTGGACAA GGTGGTATTC GGCGCGCTGG TAGTGTGGCT GGTTCTGTTC ATTGCCGCTG CGGTGGCATG GCGCTGGCCG GTGCTGCGCG AGATTCGCGC GGGTGAGCGT CGCCGTCCGG ATGCCAGCAT CTATGGCGGA CTGTTGCGTC TGCAGCCCGG CGTGGCACCG ATTCGATGGT TGCTGCTGGC TCTGCTGCTG TTCGCAGCCG CCGCGGCGCT GTTCCAGTGG GGATTCCCTT GGGCCGCCGC CAATATCCCA TTCCTACAGC AGATGTCGAA CTTCGTGGCA GCGAGCTGA
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Protein sequence | MRHGRHNSGV PAPIDLASVS DVQPFPEDDA ARMAADPANA SRARSRRAAV RGASSPQRSP VWQALGICAE LLITAAVICA LYIVWQMWWT GVEAERAQNE TTQSVDWSDP SNNGGTVTIA KAQEGDAPVQ PKDAKYGDLI AQIYIPRFGS QWHRNIVEGT TLEQLNRHGL GHYDTTQMPG QVGNFAVAGH RNGYGQPLGD VDKLQEGDPI IVRTKDYWYV YHYTRYEIVL PTDVHVIAPN PEDSTANPTK RMITLTTCEP KYSTPTHRWI SYGELAYWAK VSDGVPKELA TTDSSGAVMF STTETPSIAS RIGSLDKVVF GALVVWLVLF IAAAVAWRWP VLREIRAGER RRPDASIYGG LLRLQPGVAP IRWLLLALLL FAAAAALFQW GFPWAAANIP FLQQMSNFVA AS
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