Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1304 |
Symbol | |
ID | 6364530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1504896 |
End bp | 1505900 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642680486 |
Product | MalF-type ABC sugar transport systems permease component |
Protein accession | YP_001955247 |
Protein GI | 189440166 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00913134 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCAA TTCAGGAAGC CGTTCCCGCC GCAGCGGGGG CAGCGCAAAG CCGTGGGGGA GAGGTGAGCA ACGCGGCTGC GGCAGCCGGC AAACGTGTTC GTGCCCGCAA GCACAGCGGC GCATCGCAGA ACTCATGGCA AAGCAAGCTG CGTCCCTACC TGTTCATCGC CCCGCTGGTC ATTCTCTCCG GCGTCTTCAT CTACTACTGC ATCGGCTTCA CCGTGGCCAC ATCCTTCACC GACTGGGATG GCATCTCCAG TGAGATGGAC TTCATCGGCC TGAAGAACTA CACCAAGCTG CTCGCTCCCG GCTCCGTGTT CTGGACGGCC TTGATGAACA ACATCATCTT CATGGTCGTC ACCGTGGTCA TCCAGGCCGG GCTCGGACTG CTGCTCGCGG TGATCCTCAA GGAGCGCCTG CGCGGTTCCA GCTTCTTCAA GGCGATCTTC TTCATGCCCA TCGCCATGGC CCCGGTCATC ATCGCCGCCA TCTTCCGCAT CATCATGGAT CCGAACGTAG GCGCCATCAA CGAGGCCCTG CGCTTCCTGC ACTTGGACTT CCTGGCCCAA AGCTGGCTTG GCGATCCGCA CATCGCCCTC TACTCGATCT GTGCCATCAA CATCTTTGAA TGGATGGGCT TCTCGATGAT CATCTACTAC GCCGGTCTGA TGTCCATCTC CGATGACATC TACGAAGCCG CCAAGATCGA CGGCTGCGGA TTCTGGAACA CTCTCTTCCG CATCACCATT CCGAACCTGT CCGGCACCAC CAACACGCTT ATCCTGCTTG GCATCGTCGG CTCGCTGAAG ACCTTCGATA TCGTCATCCA GACCACAGGC GGCGGCCCTG GCCGTTCCAC CGAATTCCTG AACACCTACC TGTACAAGGC CGGCGTGCAG CAGTTCAACG GCGGTCTGTC CGCGGCCATC GGCGTGATGG TCCTCATCAT CGCCGTGGTG CTCTCCCTGA TTCAACTTGC CTTCAACAAG CGTGCCAACA ACTAA
|
Protein sequence | MTAIQEAVPA AAGAAQSRGG EVSNAAAAAG KRVRARKHSG ASQNSWQSKL RPYLFIAPLV ILSGVFIYYC IGFTVATSFT DWDGISSEMD FIGLKNYTKL LAPGSVFWTA LMNNIIFMVV TVVIQAGLGL LLAVILKERL RGSSFFKAIF FMPIAMAPVI IAAIFRIIMD PNVGAINEAL RFLHLDFLAQ SWLGDPHIAL YSICAINIFE WMGFSMIIYY AGLMSISDDI YEAAKIDGCG FWNTLFRITI PNLSGTTNTL ILLGIVGSLK TFDIVIQTTG GGPGRSTEFL NTYLYKAGVQ QFNGGLSAAI GVMVLIIAVV LSLIQLAFNK RANN
|
| |