Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1195 |
Symbol | nth |
ID | 6363397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1367202 |
End bp | 1367888 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642680371 |
Product | putative EndoIII-related endonuclease |
Protein accession | YP_001955138 |
Protein GI | 189440057 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.643643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAA CCAAATCCGC GCGTCTCACG CGCATGCATG ACGAATACGA CATTCTGCGC CAGGTGATTC CGGCACCCGC TTGCGCACTG CATTTCTCGA ATCCGCTCGA ATTGCTGATC GCCACCGTGC TCAGCGCCCA GACCACCGAC AAGCGTGTCA ACACGGTCAC CCCGGAACTG TTCGCCACCT ACCCCACCGC CCGTGACTTG GCGGCCGCGA ACCCGGCCCA AGTCGAAGAC ATCATTCATC CGCTGGGGTT CTATCGTTCG AAAACCCAGC ATCTCATCGG ACTGGCCACG GCACTGGACG AACGATTCGG CGGCGTGGTG CCGCGCACGA TGGATGAACT GACCAGCTTG CCGGGGGTCG GTCGCAAAAC CGCGAACGTC GTGCTCGGCA ACGCGTTCGA TATCCCCGGA TTCCCGGTCG ATACGCATGT GATGCGCGTA ACCGGACGAC TGCGTTGGCG GTCGGATTGG CGGTCCGCAC ACCCCGATCC CGTGAAAATC GAGAAGGAAA TCACCTCCTG TTTTCCGCCC GAAGAGTGGA CGAATCTCAG CCACCGACTG ATTCTGTTCG GCCGGGCCAC CTGCCACGCA CGTACCCCTG ACTGCGCCAA CTGCCCGCTG TCCGACACCT GCCCTAGCTA TGCGCCGCCC GCCGGCAAGA GCACGTCCAA GCGCTAA
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Protein sequence | MRETKSARLT RMHDEYDILR QVIPAPACAL HFSNPLELLI ATVLSAQTTD KRVNTVTPEL FATYPTARDL AAANPAQVED IIHPLGFYRS KTQHLIGLAT ALDERFGGVV PRTMDELTSL PGVGRKTANV VLGNAFDIPG FPVDTHVMRV TGRLRWRSDW RSAHPDPVKI EKEITSCFPP EEWTNLSHRL ILFGRATCHA RTPDCANCPL SDTCPSYAPP AGKSTSKR
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