| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1090 |
|---|
| Symbol | |
|---|
| ID | 6364612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1281175 |
|---|
| End bp | 1282452 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642680261 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001955034 |
|---|
| Protein GI | 189439953 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2270] Permeases of the major facilitator superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0778903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATC CCACGAATGT CCACGAACCG GTGCCGCAAA GCGCCAAACT GACCGCCCGC
GAGAAGAAGT GGATCATCTA CGACGTCGGC AACTCGGCAT TCGTGCTGCT GTCCACCGCC
GTCATCCCCA TTTACGCCAA ATCGCTGATG CCGGCGGACG GCAACATCGT GTCCGCCTGG
GGCTACGCGC AAACCATTGC TTCCTTGGTC ATCGCGCTGC TCATGCCGTT GCTCGGCTCC
ATCGCCGACG TGCAAGGCAT GAAAATCAAG TTCTTCCTTG GCTTCTTCGG CACTGGCGTG
GTCACCTGCT GCGCAATGGC CCTGCCCCTG ACCTGGCTAC CGTTCCTAGT CGTCTACATT
CTGGCGACCA TCGGCCTCAA CGGCTCGCTA ACGTTCTACG ATTCGATGCT CATCGACGCC
ACCTCGAACG AGCGCATGGA CAAGGTCTCC TCGCATGGCT ACGGCTGGGG CTACATCGGC
TCCACCGTGC CGTTCATCTT CTGCATCGCG CTGATCTTCG GCGGCCCGTC GCTCTTCGAC
TGGTCCACGG TGGCTTGCAC GCGCGCCTCG TTCATCATCA CCGCCATCTG GTGGGTGGCA
TTCACCATCC CGCTGCTTAC CAGCTACCGC CAAGTGCACT ATCGCGCCAC CCGTGACCAG
CTGGGCTCGG CCGTGCGCGG CACGTTCAGC GAACTGGCGG GCACGTTCGG CAAAATCGTG
AAGAACAAGC CGTTGTGGAT GTTCATGATC GCGTTCTTCT TCTACATCGA TGCCGTGAAC
ACGGTGATTT CGATGAGTAC CTCCTACGGT GCCGAGCTTG GCATCGACTC CACCCAGCTG
GTGGTGGCAC TGCTCGTCAC GCAGTTCGTG GCCTTCCCCT GCGCGATTTT GTACGGCCGA
CTGTCCGGCC GGTTCGGCAG CAAGACGATG ATCACGGCCG CAGTCGTGGC ATACATGTGC
ATCGTGTTCT TTGCCTCGTT CTTTCTGAAG TCGGCCGCGG AGTTCTGGAT TCTGGCGATT
CTGGTCGGCA TGTTCCAGGG CGGCATCCAG GCGCTCTCCC GCTCGTACTA CGGCAAGATC
ATTCCCAAGA ATCACGCCAA CGAGTATTAC GGCTTCTACG ATATCTTCGG CAAGACCGCC
TCAATCATCG GCACTTTCCT GGTGGCCACC ACCACCTCCC TGACCGGCAA CGCCTCGCTC
GGCGTGCTCT CCATCGCCGT CCTGCTCGTC GTGGCGCTGG CCTTCCTGCT CCTGCAAAAG
GACCCGACGC GGGAGTGA
|
|---|
| Protein sequence | MTDPTNVHEP VPQSAKLTAR EKKWIIYDVG NSAFVLLSTA VIPIYAKSLM PADGNIVSAW
GYAQTIASLV IALLMPLLGS IADVQGMKIK FFLGFFGTGV VTCCAMALPL TWLPFLVVYI
LATIGLNGSL TFYDSMLIDA TSNERMDKVS SHGYGWGYIG STVPFIFCIA LIFGGPSLFD
WSTVACTRAS FIITAIWWVA FTIPLLTSYR QVHYRATRDQ LGSAVRGTFS ELAGTFGKIV
KNKPLWMFMI AFFFYIDAVN TVISMSTSYG AELGIDSTQL VVALLVTQFV AFPCAILYGR
LSGRFGSKTM ITAAVVAYMC IVFFASFFLK SAAEFWILAI LVGMFQGGIQ ALSRSYYGKI
IPKNHANEYY GFYDIFGKTA SIIGTFLVAT TTSLTGNASL GVLSIAVLLV VALAFLLLQK
DPTRE
|
|---|
| |