Gene BLD_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1060 
Symbol 
ID6364164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1245965 
End bp1247191 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content57% 
IMG OID642680231 
ProductMalE-type ABC sugar transport system periplasmic component 
Protein accessionYP_001955004 
Protein GI189439923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.065415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTGG CCGCTACGGC AGCCATGGTC GTGCCGATGG CCGCATGCGG TTCCGGTACC 
GCAGGTGGCG GGAAAACCAA GATTTCGTTC TATTCCTACT TCAAGGACAA CCAGATTGGT
GAGGTCGTCA AGGGGTTCGA GAAGAAGAAC CCCGACATTA CCCTCGACGT GCAGTATGGC
CAGGATCCGG CACAGTACAT CTCGACACTG CAAACCCGTC TTGCTGGTGG CAAGGCGCCG
ACCATCTTCA ATCTGACGAT GGATAACCGT ACCGATGTCA TGAAATCCGG TGCCGCGTTG
GACATCTCCG GCGAGGATTT CCTCTATGGC ATCGACGACA CAAACTTCGC CTTGTTCCAG
CAGGATGGCA AGACCTACGG CATGCCGGTT TCCGCATGGG TGGGCGTGTT CTTCTACAAC
AAAGACATTC TCAAGAAGGC CGGATGCGAT AAATTCCCCA AGACCTGGGA TGAATTCATC
GAGATGGGCA AGAAGATCAA CTCCAACGGA AGCACCGCTT TCCTGGAGGA CTTCAATACT
CAGATCGCTG GCTCGTTCAC CGGCTTGCTG GCTAGCTATT ACGGCGAGCA GGGTAAGTCC
GGCGATCTTG ACGCGGACAT CTGGTCCGGC AAGTCCACTT TCACCAAGGA CTGGACTCCG
GTATTCAAGA AATGGGAAGC TGCCGCCAAG GCCGGTGTAA TTCCTCAGAA ATCCGTTGGT
CTGTCGGCCG ATCAGATCAA GCAGGAATTC GTGAGCGGCA ATCTTGGCGT CATGCGCTCC
GGTCCATGGG ATCTGCCTGA TCTGCAGAAG TCAGACATCG ACTTCGGGGT GGCACCGTTC
CCGGCCTACA GCAAGGAAGA CGGCCAGTGG ATCAACGGTG GCCCCGACCA AGGCTTCGCC
ATCGCGTCCA AGGCCTCCGA CAAGGAGCAG GCCGCAGCCA AAAAGTTCCT TGCCTATCTC
AACAGCGAAG AGGGCCTCGA GGCGTTTACC TCTGCCGCTG GCACCCTGTC GCTGTCGAGC
AAGTACAATG CCGAACCTCC TGCCGAACTG AAGGATGTAG TGGATAACTA CTTCAAGCAG
AACAAGTTCT ACTGGGTCAA CTGGCCGAAG TCCCCTACGG TGATGTCCAC CGAGGATATC
GCCCAGCAGC AGAAGATCGT GCAGGGCCAG ATTTCCGCCA AGGAGGCTGC CAAGGCTCTC
GACGCCAAGT GGGCGACGCT GAAGTAA
 
Protein sequence
MAVAATAAMV VPMAACGSGT AGGGKTKISF YSYFKDNQIG EVVKGFEKKN PDITLDVQYG 
QDPAQYISTL QTRLAGGKAP TIFNLTMDNR TDVMKSGAAL DISGEDFLYG IDDTNFALFQ
QDGKTYGMPV SAWVGVFFYN KDILKKAGCD KFPKTWDEFI EMGKKINSNG STAFLEDFNT
QIAGSFTGLL ASYYGEQGKS GDLDADIWSG KSTFTKDWTP VFKKWEAAAK AGVIPQKSVG
LSADQIKQEF VSGNLGVMRS GPWDLPDLQK SDIDFGVAPF PAYSKEDGQW INGGPDQGFA
IASKASDKEQ AAAKKFLAYL NSEEGLEAFT SAAGTLSLSS KYNAEPPAEL KDVVDNYFKQ
NKFYWVNWPK SPTVMSTEDI AQQQKIVQGQ ISAKEAAKAL DAKWATLK