| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1045 |
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| Symbol | vapC |
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| ID | 6362955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 1228815 |
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| End bp | 1229234 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642680216 |
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| Product | putative nucleic acid-binding protein |
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| Protein accession | YP_001954989 |
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| Protein GI | 189439908 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.883513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATTC TGGACACCAA CGTCATCAGC GAAATCATCA AGAAACAGCC AGACGAACAC
GTTGCCAATT GGCTGAGGAA CCAAGATACA AGCAATTTGG CAACCACCGC CATCACCGTC
GCCGAGTTGT TGGCCGGAAT ATGTCGCATG CCTGAAGGCA AACGACGAAA GTACACAGAT
ACGACCGTCA AGCTGGCGCT TATGACATTA GAGGACAGAA CGTTCGCATT TGACACTCAG
GCAGCTGCGG ATTATGCCCA TATCCTTGTC GAACGCGAAC ACAGGGGCAC ACCTACCAGT
ATTCAAGACG CCATGATTGC GGCAATTGCC TGTTCCTGGG ATGCGGCCAT AGCCACGCGC
AATATCAAGG ACTTCGAAGG TACCGACGTG GAATTGATTA ATCCGTGGGA GTTTGCATAG
|
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| Protein sequence | MIILDTNVIS EIIKKQPDEH VANWLRNQDT SNLATTAITV AELLAGICRM PEGKRRKYTD
TTVKLALMTL EDRTFAFDTQ AAADYAHILV EREHRGTPTS IQDAMIAAIA CSWDAAIATR
NIKDFEGTDV ELINPWEFA
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