Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0998 |
Symbol | |
ID | 6363662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1168106 |
End bp | 1169752 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642680166 |
Product | putative permease |
Protein accession | YP_001954942 |
Protein GI | 189439861 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCG ACACCGCCCA AAGCCATCAG GCCGAGCAAC GGAAGTGGAG AGTGTGCGTG GCTGGAGAGA GCAGGATCAA GAATTGTCGC GGCGAACTGC AGCGGGTGCT GAGCCAGGAG GAATCGTACG TCGATGGCAA GCTGAGCCAT GCGGCGTTTA TTTCGATCGC AATCCTGACC TTCATCACCT TCGTGGGCAA CTTCACGCAG TTGCAGCTGA GTTCCGCGCT GCCGATTATC GTTTCCGAAT TCCACATCTC CGTAACCACC GGGCAGTGGC TCACCTCCGT GTTCCAGCTG GTCATGGGCG TGATGGTGCC GCTAACCGCG TTTCTGACCC GGCGCTTCTC CACCCGCCAG ATCGTCATCT GCTCGATGGC GGTGTTCACA CTCGGCTCCG TGCTGGCATG GTTGGGGCCA AACTTCGTAT GGGTGCTGGT CGGGCGCGTG CTCGAAGCTG CCGGCACAGG CGTGATGTGG CCGGTGCTGC AAATCACCGT GTTCTCCATT TACCCGCTGT CTCGCCGCGG GTTTGCCATG GGCACGGTGG GCATGGCCAT GAGCGTGGCG CCAGCCATCG GCCCCACCTT GGGCGGCTGG CAGACCGATG CCAACGGCTG GCGCTCGATC TTCCTGACCA TGACCATCAT TGGCGTAATC TCGCTGCTGG CGGCCATGTT CGGACTGCAT AATTTCGGTT CACACGACCC TTCGGCCCGC GCGGACTTCT TCTCGGCATG CCTGTCGGTG ATCGGCTTTG GCGGGCTTAT GTTCGGCTTC ACCAATTCAG AGACCTATGG ATTCGCGGCA CCGGTCACGT GGGGGCCGAT GGTTGTGGGA CTGGTCGGCA TTGTCTGGTT CGTGCTGCGT AACCTGCGCG CTGGCAAGCG GTATCGCGAG GCCGTAGCCA AGGACAAGTC GGCACTCCCC CAGCCGCCGC TGCTGGACTT GGAAGTGCTG AAGAACCGTT CGTTCACCGT CGGCACCATT ACCGCGTCGC TGGCATTTTT CGCGTTCAGT TCGATTTTGG TCATCATGCC GCTCTACATC CAGACTGACC GCGGCTATTC GGCCACGATG AGCGGTCTGA TCATGCTGCC GGGCGCCATC GGCCAGTGCG TCTCCCAGTT CTTCGGCGGC CGCGCGATGG ATCGGTTCGG CGCGCGCCCG GTGGCTTTGT TCGGTTCGAT TGTGTTGACC CTTGGCACCT TGGGCATGTC GCTGGTGGCG ATGGATACGT GGATCTGGTG GGTATCGATC TGCCAGTTCA TCCGTCAGAT CGGCATGGGT TTCCTGCTGA TGCCGATTAC CACGTGGTCC CTGAATTGCC TGAACGGGCC GAGCGAAGTG TCCGCCGGAT CATCGGTGAC GAATACCGCG CGTCAGATTG CGGGCGCTGT GGGCGCACCC GTGTTGGTGA TTCTGATGGA AACGTTTGCC GCTTTGCATA AGCAGGGCGG CGCCTCCGCC GTCGCCGCTT CGATTTTCGG CATTCAATGG GCGCTGCGAA TCTCCGCAAT AATCTGTCTG GCAATGGTGT TGATGGTGTT CTTCGGCGTC AAGGGCGACG GTGCCGGTCG TACGCGAGAC ATTATTTCCT TGCGCGCGCT GCGCGAACGG CGTGCGCGGC GTATGGCTGC GAACTGA
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Protein sequence | MPTDTAQSHQ AEQRKWRVCV AGESRIKNCR GELQRVLSQE ESYVDGKLSH AAFISIAILT FITFVGNFTQ LQLSSALPII VSEFHISVTT GQWLTSVFQL VMGVMVPLTA FLTRRFSTRQ IVICSMAVFT LGSVLAWLGP NFVWVLVGRV LEAAGTGVMW PVLQITVFSI YPLSRRGFAM GTVGMAMSVA PAIGPTLGGW QTDANGWRSI FLTMTIIGVI SLLAAMFGLH NFGSHDPSAR ADFFSACLSV IGFGGLMFGF TNSETYGFAA PVTWGPMVVG LVGIVWFVLR NLRAGKRYRE AVAKDKSALP QPPLLDLEVL KNRSFTVGTI TASLAFFAFS SILVIMPLYI QTDRGYSATM SGLIMLPGAI GQCVSQFFGG RAMDRFGARP VALFGSIVLT LGTLGMSLVA MDTWIWWVSI CQFIRQIGMG FLLMPITTWS LNCLNGPSEV SAGSSVTNTA RQIAGAVGAP VLVILMETFA ALHKQGGASA VAASIFGIQW ALRISAIICL AMVLMVFFGV KGDGAGRTRD IISLRALRER RARRMAAN
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