| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0912 |
|---|
| Symbol | |
|---|
| ID | 6364299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1049198 |
|---|
| End bp | 1050922 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642680080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001954856 |
|---|
| Protein GI | 189439775 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000369378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACG ATACATTTTC CTTCTCCTCT CCTGACGATC AGGAGACGGC GGTGCTGCAG
CCTGTGGCCA CCGATGGGCT GTTCGCAGCC GCGGATTCAG GTACCGCCAC ACCACAGCAA
AGTGACAATG GCACCAATAA CCATGCCGAT AATACAGCCT ATGTGGGTGA ACATGTTATG
GCATCTACCA CCGCTAAATC ACATGGCAAG GCCGCACGGA TTGCCATCAT AACCATATTT
GCAGTGTTGC TTGCCGCATT AATAGCCTAT TTCTTCGTCG GACGTTGGTA CTTCCAAGAC
AAGGCTGCGC CCGGTGTTCA TTTGGGCAAT GTCTCTGTCA TGGGCCAGAC CCGCGAAGAA
CTTGCGAATA CTGTGAAGCA GCGGCTGAAT AACACCACGG TGACGTTCAC CGCCGAAGGC
AACAGCGTCA AAGCCTCGCT GAAGGACCTT GGCGTCACCG TCGACACGGA TAAAACCGTG
GATGCGCTGT TGAACGCGAA GACCGGCGAC GTGGCCAAGC TCAATATTTT CGATCAGCCG
CATATCGCTC TGACCGCCAC CACGGACAAA GAGACTGCCG AACAATTCGT CACCGCCGGC
CTGGTCGATG AGGCCGACCG AGCGCAGATT GCCACCGTTG TCTACAACAA GAGCACCAAA
CAGTTCGACT ACACCGCGGG TCAGGACGGC AAGGGCCCGG ATACCAATGT TGTCAATGCT
GCAGTCAAGG AGGCCGTCGC GACCCCGGGC GAAAATGCGA CGGTGCCGGT CAAGCTACAG
ACCGCAAAGA ATCCGATTGA TGACGCGAGC GCACAGCAAA CACAGTTTGA CGCCAATGCC
AGGCTTGGCC TCAAACTGAC CGTAGACAAC GGCGTGAACA AGAGCGTCAC CATCCCGGCC
GATACCATTG CCTCATTCCT CAAGCCCACG GTGAATAAGG CGGAAGGCAC CATGAGTCTG
GTAGTCGACC GCGATGCCAT CACCAAGTAC GTCACCAGTG ACAGCGTAAC CAAAGAACTG
ACTGTTCCCA AGGTGACACG CGAGGTCTAC ATCACGCCGA AAGACGAAGG CGGCGTGGAA
ATTGGTGCCG ATAAGACACT CGGCGTGGAT GGTATTGAAG TGACTGGCGC CGGGGACGCC
CCCGAACGTC TGGCTACCGC CATCGAGCAG AACCAGTCCA CTGATTCCAC TGTGGCTGTG
AAAGACAGCC CGTATGATGT CAAGCAGGTC GAGGTGCCTC ATAACTTCGA TACGGCAAAT
GGCGATAAGT GGGTTCATGT TGATCTGACG AACCAGACTG CCACTGCATA TCAGGGCACC
ACGGTGGTCA AGAAGTTCAA CATCGCTTCT GGCAAGCCCA CCGCCGATGG TTCCATGCTG
TCCGATACCG GCACGTTCTA CGTGTATCTC AAGTACGAAT CGCAGACCAT GGTTGGCGAA
GGCTACAACC AGCCAGGCAC GCCGTGGGTT TCCTACTATA ACGGCGGCGA GGCTCTGCAC
GGTGTTCCTG CATACATGTG GGGCGAGCAC CCCATCTATG TGCAGCAGGG TATCCCAGGC
TCGCACGGCT GCATCAACAT GCAGGTGGCC GATGCCAAGT GGATGTACGA CTTTGCCACC
ATCGGCACTC GTGTGGTCGT TGATGGCACC ACACCGACTT CCGGTCAGAC GTTGCGCCCG
GCTGGTGCGG ATGCCACTGG ATGGCAGGGC GGCAACGCCA GCTGA
|
|---|
| Protein sequence | MANDTFSFSS PDDQETAVLQ PVATDGLFAA ADSGTATPQQ SDNGTNNHAD NTAYVGEHVM
ASTTAKSHGK AARIAIITIF AVLLAALIAY FFVGRWYFQD KAAPGVHLGN VSVMGQTREE
LANTVKQRLN NTTVTFTAEG NSVKASLKDL GVTVDTDKTV DALLNAKTGD VAKLNIFDQP
HIALTATTDK ETAEQFVTAG LVDEADRAQI ATVVYNKSTK QFDYTAGQDG KGPDTNVVNA
AVKEAVATPG ENATVPVKLQ TAKNPIDDAS AQQTQFDANA RLGLKLTVDN GVNKSVTIPA
DTIASFLKPT VNKAEGTMSL VVDRDAITKY VTSDSVTKEL TVPKVTREVY ITPKDEGGVE
IGADKTLGVD GIEVTGAGDA PERLATAIEQ NQSTDSTVAV KDSPYDVKQV EVPHNFDTAN
GDKWVHVDLT NQTATAYQGT TVVKKFNIAS GKPTADGSML SDTGTFYVYL KYESQTMVGE
GYNQPGTPWV SYYNGGEALH GVPAYMWGEH PIYVQQGIPG SHGCINMQVA DAKWMYDFAT
IGTRVVVDGT TPTSGQTLRP AGADATGWQG GNAS
|
|---|
| |