Gene BLD_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0796 
SymboltrkA 
ID6362910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand+ 
Start bp917555 
End bp918217 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content62% 
IMG OID642679962 
ProductTrk-type K+ transport systems membrane component 
Protein accessionYP_001954740 
Protein GI189439659 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAA AACCGAGCGG CAACAAAAGC GTGCTGGTCA TCGGACTGGG CCGTTTCGGC 
GGGTCCGTGG CCGCCACCCT CGACCAGATG GGTCAGGATG TGCTCGCAGT GGACAAGAAC 
CCGGAGCTTG TGGCCCGTTG GTCCGCGCAT CTGCCCACCA TTCAGGCCGA TATGACCGAT 
GTGCTGGCCA TCGAGCAGAT CGACGCCTCC CAGTTCGACA CGGCCATCGT GGCCATCGGC 
GACAGCATCG AGGCTTCGGT GATCATCACC GGCAACCTGC TGGACGCCGG CGTTTCCGAC 
CTGTGGGCCA AGTCCGTGTC CCAGGAGCAT GCGCGCATTC TGCAGCGCAT CGGCGCCCGC 
CACATCATCA ACGCGGAGAC CGATGCCGGC AAGCGCGTGG GCCATCTGGT GGCCGGCAAT 
TATCTGGATT ACATCGAAAT CGACGGGCCG TACACCGTCG TCAAGGTCCA CACGCCCCTG 
TACGCGGTAG GCCGCAGCAT CGAGGACGTA CAAGTACATG ACAAGTACGG CGTGACCGTG 
GTGGGCCTCA AGGCCCCAGG CAAGGAGTTC CAGTACGGCT CCAAGGAACT GGTCATGCAT 
CGCAACGACG AACTCATCCT CATGGGCAAG CAGGATCAGA TCGACCACTT CATCCAAGGC 
TAA
 
Protein sequence
MAAKPSGNKS VLVIGLGRFG GSVAATLDQM GQDVLAVDKN PELVARWSAH LPTIQADMTD 
VLAIEQIDAS QFDTAIVAIG DSIEASVIIT GNLLDAGVSD LWAKSVSQEH ARILQRIGAR 
HIINAETDAG KRVGHLVAGN YLDYIEIDGP YTVVKVHTPL YAVGRSIEDV QVHDKYGVTV 
VGLKAPGKEF QYGSKELVMH RNDELILMGK QDQIDHFIQG