Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0747 |
Symbol | lraI1 |
ID | 6362774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 858430 |
End bp | 859626 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642679912 |
Product | Mn2+/Zn2+ ABC transporter periplasmic protein |
Protein accession | YP_001954691 |
Protein GI | 189439610 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.209831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACTC AAATCACACG ACTTACGCGA CTCGCCGCAG CCGGCCTGAG CGCCGTCCTG TTGTTCGCGA CCACCGCATG CGCAGCCACC TCCCCCGCTG AAACCGAGCC GGACAACAAG ACCAGCGTTC CCGCACCGAC CGGGCCGATC AATGTGGTGG CCTCCCTCAA TCAATGGGGC TCGCTGGCCG CCGAGCTGGG CGGCGATGAT GTGGAAGTCA CGTCCATCGT GAACTCCACC AATGTGGATG CCCACGATTT CGAGCCAAAG ACCTCGGATG TCGCCAAGCT GTCCAAGGCC CAAATCATCG TGGCCAACGG TGCGGGCTAC GATTCCTGGG CCACCAAATC GATGACCAAG ACCACGAATA TCGTATCCGC CGCTTCCGTC ATGGGTGCCG TCGAGGGCGA TAACCCGCAT CTGTGGTTCT CCAAAGACGC TCGATCCAGC ATGGCCACGG CCATCACCGA TGCATATATA AAGGCACTCC CCAGCAAGAA GAAAGCCTTC CAGAAGCGGC TCAAGGCATG GCAGGCGGAC GAGAAATCGT TGGAAACATG GGCGTCCGAG TTCACCAAGT CCCACTCCAA CCTCACCTAT GCAGCCACCG AACCCGTGGT CTATTATCTG ATGGCCGATC TTGGGTTCAA AGATCAGACG CCCAAGGGGT ATACGCAATC GACCGCTTCC GGCGGCGAAC CGGCACCCGC GGACCTGCAG TCTTTCCAGA AACTCATCGA AGACAAGGGC GTGGATGTGC TGGTCAACAA CACGCAGGAA GCCAGTGACG CGACCAATAT GATCACTGGC GCTGCCGGTC GCGCCGATGT GCCGGTAGTC GACGTCTCCG AACAAATGCC CAAGGACGCC GACACGCTGA ACGCCTGGAT CAACCAGCTC ATCAACACCA TCATCGACGC GGTGGATCCA AGCTATGGCT GCGAAGACGC CACGGACGGC GATACCGCGG ACAGCAACGC GAATTCCGAT GATTCCAGCG CCGAAGGCTC CGCCACGGAT GATGCCAATG CGCAAGACTC CAAGGCCAGC ACCGGTTCCA GCACGGACCC CAAGTACATC CGTCAGTGCA AGGCGGCCGC ATCCAGTGAC TCATCTCAGG ATTCGGCAAA GGCCGATGCC GCCAATGGCG ATTCCGGCGA TGCCTCCGGC AACGACCAGA CCGACTCCGG CAAATAG
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Protein sequence | MGTQITRLTR LAAAGLSAVL LFATTACAAT SPAETEPDNK TSVPAPTGPI NVVASLNQWG SLAAELGGDD VEVTSIVNST NVDAHDFEPK TSDVAKLSKA QIIVANGAGY DSWATKSMTK TTNIVSAASV MGAVEGDNPH LWFSKDARSS MATAITDAYI KALPSKKKAF QKRLKAWQAD EKSLETWASE FTKSHSNLTY AATEPVVYYL MADLGFKDQT PKGYTQSTAS GGEPAPADLQ SFQKLIEDKG VDVLVNNTQE ASDATNMITG AAGRADVPVV DVSEQMPKDA DTLNAWINQL INTIIDAVDP SYGCEDATDG DTADSNANSD DSSAEGSATD DANAQDSKAS TGSSTDPKYI RQCKAAASSD SSQDSAKADA ANGDSGDASG NDQTDSGK
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