Gene BLD_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0747 
SymbollraI1 
ID6362774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp858430 
End bp859626 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content60% 
IMG OID642679912 
ProductMn2+/Zn2+ ABC transporter periplasmic protein 
Protein accessionYP_001954691 
Protein GI189439610 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.209831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACTC AAATCACACG ACTTACGCGA CTCGCCGCAG CCGGCCTGAG CGCCGTCCTG 
TTGTTCGCGA CCACCGCATG CGCAGCCACC TCCCCCGCTG AAACCGAGCC GGACAACAAG
ACCAGCGTTC CCGCACCGAC CGGGCCGATC AATGTGGTGG CCTCCCTCAA TCAATGGGGC
TCGCTGGCCG CCGAGCTGGG CGGCGATGAT GTGGAAGTCA CGTCCATCGT GAACTCCACC
AATGTGGATG CCCACGATTT CGAGCCAAAG ACCTCGGATG TCGCCAAGCT GTCCAAGGCC
CAAATCATCG TGGCCAACGG TGCGGGCTAC GATTCCTGGG CCACCAAATC GATGACCAAG
ACCACGAATA TCGTATCCGC CGCTTCCGTC ATGGGTGCCG TCGAGGGCGA TAACCCGCAT
CTGTGGTTCT CCAAAGACGC TCGATCCAGC ATGGCCACGG CCATCACCGA TGCATATATA
AAGGCACTCC CCAGCAAGAA GAAAGCCTTC CAGAAGCGGC TCAAGGCATG GCAGGCGGAC
GAGAAATCGT TGGAAACATG GGCGTCCGAG TTCACCAAGT CCCACTCCAA CCTCACCTAT
GCAGCCACCG AACCCGTGGT CTATTATCTG ATGGCCGATC TTGGGTTCAA AGATCAGACG
CCCAAGGGGT ATACGCAATC GACCGCTTCC GGCGGCGAAC CGGCACCCGC GGACCTGCAG
TCTTTCCAGA AACTCATCGA AGACAAGGGC GTGGATGTGC TGGTCAACAA CACGCAGGAA
GCCAGTGACG CGACCAATAT GATCACTGGC GCTGCCGGTC GCGCCGATGT GCCGGTAGTC
GACGTCTCCG AACAAATGCC CAAGGACGCC GACACGCTGA ACGCCTGGAT CAACCAGCTC
ATCAACACCA TCATCGACGC GGTGGATCCA AGCTATGGCT GCGAAGACGC CACGGACGGC
GATACCGCGG ACAGCAACGC GAATTCCGAT GATTCCAGCG CCGAAGGCTC CGCCACGGAT
GATGCCAATG CGCAAGACTC CAAGGCCAGC ACCGGTTCCA GCACGGACCC CAAGTACATC
CGTCAGTGCA AGGCGGCCGC ATCCAGTGAC TCATCTCAGG ATTCGGCAAA GGCCGATGCC
GCCAATGGCG ATTCCGGCGA TGCCTCCGGC AACGACCAGA CCGACTCCGG CAAATAG
 
Protein sequence
MGTQITRLTR LAAAGLSAVL LFATTACAAT SPAETEPDNK TSVPAPTGPI NVVASLNQWG 
SLAAELGGDD VEVTSIVNST NVDAHDFEPK TSDVAKLSKA QIIVANGAGY DSWATKSMTK
TTNIVSAASV MGAVEGDNPH LWFSKDARSS MATAITDAYI KALPSKKKAF QKRLKAWQAD
EKSLETWASE FTKSHSNLTY AATEPVVYYL MADLGFKDQT PKGYTQSTAS GGEPAPADLQ
SFQKLIEDKG VDVLVNNTQE ASDATNMITG AAGRADVPVV DVSEQMPKDA DTLNAWINQL
INTIIDAVDP SYGCEDATDG DTADSNANSD DSSAEGSATD DANAQDSKAS TGSSTDPKYI
RQCKAAASSD SSQDSAKADA ANGDSGDASG NDQTDSGK