| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0745 |
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| Symbol | rpsA |
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| ID | 6362826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 855856 |
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| End bp | 857331 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642679910 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001954689 |
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| Protein GI | 189439608 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.146171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGA ACAACACTGA AGTCACCAAG GTTGCCATCA ACGACATCGG CACCGAAGAG
GACTTCATCA AGGCAGTCGA TTCCACCATC AAGAACTTCG ATGATGGTGA TCTGGTTGAG
GGCACCGTCG TCAAGATCGA TCACGACGAA GTCCTCCTGG ACATCGGCTA CAAGACCGAG
GGTGTCATCC CCTCCCGCGA GCTTTCCATC AAGAAGGACG TTGATCCTGA CGAAGTCGTC
GAGGTCGGCG ACACCATCGA GGCCCTTGTC GTCACCAAGG AAGACAAGGA AGGCCGTCTG
ATTCTGTCCA AGAAGCGTGC CCAGTACGAG CGCGCCTGGG GCGACATCGA GAAGATCAAG
GAAGCTGACG GCGTCGTTGA GGGCACCGTC ATCGAAGCCG TCAAGGGCGG CCTCATCGTC
GACATCGGTC TGCGTGGCTT CCTGCCTGCC TCCCTCGTTG AGATGCGTCG CGTCCGCGAC
CTCTCCCCGT ACATCGGCCA GAAGATCAAG GCCAAGATCC TTGAGCTCGA CAAGAACCGC
AACAACGTGG TCCTGTCCCG TCGCCAGTAC CTCGAGGAGA CCCAGTCCGA GGTCCGCGAG
ACCTTCCTGT CCCAGCTCAA GAAGGGCCAG ATCCGTGAGG GCGTGGTGTC CTCCATCGTT
AACTTCGGTG CTTTCGTCGA TCTCGGCGGT GTTGATGGCC TGATCCACGT TTCCGAGCTG
TCCTGGAAGC ACATCGACCA CCCGTCTGAG GTCGTCAAGG TCGGCGACAA GGTCACCGTC
GAGGTGCTCG ACGTCGATCT CGACCGTGAG CGTATCTCCC TGTCCCTGAA GGCGACTCAG
GAGGATCCGT GGCAGCGCTT CGCTCGCACC CACGTTCCCG GCCAGATCGT CAAGGGCAAG
GTCACCAAGA TCGTCCAGTT CGGTGTCTTC ATCTCCGTCG AGGACGGCAT CGAGGGCCTG
GTGCACATCT CCGAGCTCGC CAACCGTCAC GTCGAGAACC CGGAGACCGT GGTCAAGCCG
GGCGAGACCG TGTTCGTCAA GGTGATCGAC GTCGACCTCG ATCGTCGCCG CATCTCCCTG
TCCCTCAAGC AGGCCAACGA CTCCGTTGAC CCGGCTTCCG AGGACTTCGA TCCGGCCATC
TACGGCATGC CGGCCGAGTA CGACGAGCAG GGCAACTACA AGTACCCCGA AGGCTTCGAC
CCGAACACCA ACGAGTGGAT CGCTGGTTAC GAGAAGCAGC GCGAGGAGTG GGAGTCTCAG
TACGCCGCCG CTCACGAGCT GTGGGAGGAG CACAAGGAGT TCGTGGCCAA GGAGCTGGAG
AACGCTGCCG AATCCGCAGC CGCCGACGGC CAGGGCCCGA AGGAAGAGAA GCCGGTCGAG
GAGACCTCCA ACTACTCTTC CGCTGCTCCG ACTACCGGTA CCCTCGCCGA CTCCGATCAG
CTCGCCGCCC TGCGCGACCA GCTGCTCGGC AAGTGA
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| Protein sequence | MAENNTEVTK VAINDIGTEE DFIKAVDSTI KNFDDGDLVE GTVVKIDHDE VLLDIGYKTE
GVIPSRELSI KKDVDPDEVV EVGDTIEALV VTKEDKEGRL ILSKKRAQYE RAWGDIEKIK
EADGVVEGTV IEAVKGGLIV DIGLRGFLPA SLVEMRRVRD LSPYIGQKIK AKILELDKNR
NNVVLSRRQY LEETQSEVRE TFLSQLKKGQ IREGVVSSIV NFGAFVDLGG VDGLIHVSEL
SWKHIDHPSE VVKVGDKVTV EVLDVDLDRE RISLSLKATQ EDPWQRFART HVPGQIVKGK
VTKIVQFGVF ISVEDGIEGL VHISELANRH VENPETVVKP GETVFVKVID VDLDRRRISL
SLKQANDSVD PASEDFDPAI YGMPAEYDEQ GNYKYPEGFD PNTNEWIAGY EKQREEWESQ
YAAAHELWEE HKEFVAKELE NAAESAAADG QGPKEEKPVE ETSNYSSAAP TTGTLADSDQ
LAALRDQLLG K
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