Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0701 |
Symbol | xfp |
ID | 6363240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 803455 |
End bp | 805932 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679861 |
Product | putative phosphoketolase |
Protein accession | YP_001954645 |
Protein GI | 189439564 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAGTC CTGTTATTGG CACCCCTTGG AAGAAGCTCA ACGCTCCGGT TTCCGAGGAA GCCCTCGAAG GCGTTGACAA GTACTGGCGC GTTGCCAACT ACCTTTCCAT CGGCCAGATT TATCTGCGTT CCAACCCGCT GATGAAGGAG CCCTTCACCC GCGAAGATGT GAAGCACCGT CTGGTGGGCC ACTGGGGCAC TACCCCTGGC CTGAACTTCC TCATCGGCCA CATCAACCGT TTCATTGCTG ACCACGGCCA GAACACCGTG ATCATCATGG GCCCGGGCCA CGGTGGCCCG GCCGGTACCT CCCAGTCCTA CCTGGACGGC ACCTACACCG AGACCTTCCC GAAGATCACC AAGGACGAAG CTGGTCTGCA GAAGTTCTTC CGTCAGTTCT CTTACCCGGG CGGCATTCCG TCCCACTTCG CTCCGGAGAC CCCGGGCTCC ATCCACGAGG GTGGTGAGCT GGGTTACGCT CTGTCCCACG CTTACGGCGC CATCATGGAC AACCCGAGCC TGTTTGTCCC GGCCATCGTC GGCGACGGCG AGGCTGAGAC CGGCCCGCTG GCTACCGGCT GGCAGTCCAA CAAGCTCGTG AACCCGCGCA CCGACGGTAT CGTGCTGCCG ATCCTGCACC TCAACGGCTA CAAGATCGCC AACCCGACCA TCCTGTCCCG CATCTCCGAC GAAGAGCTCC ACGAGTTCTT CCACGGCATG GGTTACGAGC CCTACGAGTT CGTCGCTGGC TTCGATGATG AGGACCACAT GTCCATCCAC CGTCGCTTCG CCGAGCTGTG GGAGACCATC TGGGACGAGA TCTGCGACAT CAAGGCCACC GCTCAGACCG ACAACGTGCA CCGTCCGTTC TACCCGATGC TGATCTTCCG CACCCCGAAG GGCTGGACCT GTCCGAAGTA CATCGACGGC AAGAAGACCG AGGGCTCCTG GCGTTCCCAC CAGGTGCCGC TGGCTTCCGC CCGCGACACC GAGGCCCACT TCGAGGTTCT CAAGAACTGG CTCGAGTCCT ACAAGCCGGA AGAGCTGTTC GACGCCAACG GTGCTGTCAA GGACGACGTC CTTGCCTTCA TGCCGAAGGG CGAGCTGCGT ATCGGTGCCA ACCCGAACGC CAACGGTGGT GTGATCCGCA ACGACCTGAA GCTGCCGAAC CTCGAGGACT ACGAGGTCAA GGAAGTGGCT GAGTACGGCC ACGGCTGGGG CCAGCTCGAG GCCACCCGTA CCCTGGGTGC CTACACTCGC GACATCATCA AGAACAACCC GCGCGACTTC CGCATCTTCG GACCGGATGA GACCGCTTCC AACCGTCTGC AGGCTTCCTA CGAAGTCACC AACAAGCAGT GGGATGCCGG CTACATCTCC GACGAGGTCG ACGAGCACAT GCACGTCTCC GGCCAGGTCG TTGAGCAGCT GTCCGAGCAC CAGATGGAAG GCTTCCTCGA GGCCTACCTG CTGACCGGTC GTCACGGCAT CTGGAGCTCC TACGAGTCCT TCGTCCACGT GATCGACTCC ATGCTGAACC AGCACGCCAA GTGGCTTGAG GCTACCGTCC GCGAGATTCC GTGGCGCAAG CCGATCGCCT CCATGAACCT GCTGGTCTCC TCCCATGTTT GGCGTCAGGA CCACAACGGC TTCTCCCACC AGGATCCGGG TGTCACCTCC GTCCTGCTGA ACAAGTGCTT CCACAACGAC CACGTCATCG GCATCTACTT CGCCACCGAT GCGAACATGC TGCTGGCCAT CGCCGAGAAG TGCTACAAGT CCACCAACAA GATCAACGCC ATCATCGCTG GTAAGCAGCC TGCTGCCACC TGGCTGACCC TGGACGAGGC TCGTGCCGAG CTCGAGAAGG GTGCCGCCGC TTGGGATTGG GCTTCCACCG CCAAGAACAA CGATGAGGCC GAGGTCGTGC TTGCCGCCGC CGGCGATGTC CCGACTCAGG AGATCATGGC TGCTTCCGAC AAGCTGAAGG AACTGGGCGT CAAGTTCAAG GTTGTGAACG TTGCCGACCT GCTCTCCCTG CAGTCCGCCA AGGAGAACGA CGAGGCTCTG ACCGACGAGG AGTTCGCCGA CATCTTCACC GCCGACAAGC CGGTGCTGTT CGCGTACCAC TCCTACGCTC ACGACGTGCG TGGCCTGATC TACGACCGTC CGAACCACGA CAACTTCAAC GTCCACGGCT ACGAGGAGGA GGGCTCCACC ACCACCCCGT ACGACATGGT TCGTGTCAAC CGCATCGACC GCTACGAGCT GACCGCTGAG GCTCTGCGCA TGATCGACGC CGACAAGTAC GCCGACAAGA TCGACGAGCT CGAGAAGTTC CGTGATGAGG CCTTCCAGTT CGCCGTCGAC AACGGCTACG ACCACCCGGA CTACACCGAC TGGGTGTACT CCGGCGTGAA CACCGACAAG AAGGGTGCCG TCACCGCTAC CGCCGCTACC GCTGGCGACA ACGAGTGA
|
Protein sequence | MTSPVIGTPW KKLNAPVSEE ALEGVDKYWR VANYLSIGQI YLRSNPLMKE PFTREDVKHR LVGHWGTTPG LNFLIGHINR FIADHGQNTV IIMGPGHGGP AGTSQSYLDG TYTETFPKIT KDEAGLQKFF RQFSYPGGIP SHFAPETPGS IHEGGELGYA LSHAYGAIMD NPSLFVPAIV GDGEAETGPL ATGWQSNKLV NPRTDGIVLP ILHLNGYKIA NPTILSRISD EELHEFFHGM GYEPYEFVAG FDDEDHMSIH RRFAELWETI WDEICDIKAT AQTDNVHRPF YPMLIFRTPK GWTCPKYIDG KKTEGSWRSH QVPLASARDT EAHFEVLKNW LESYKPEELF DANGAVKDDV LAFMPKGELR IGANPNANGG VIRNDLKLPN LEDYEVKEVA EYGHGWGQLE ATRTLGAYTR DIIKNNPRDF RIFGPDETAS NRLQASYEVT NKQWDAGYIS DEVDEHMHVS GQVVEQLSEH QMEGFLEAYL LTGRHGIWSS YESFVHVIDS MLNQHAKWLE ATVREIPWRK PIASMNLLVS SHVWRQDHNG FSHQDPGVTS VLLNKCFHND HVIGIYFATD ANMLLAIAEK CYKSTNKINA IIAGKQPAAT WLTLDEARAE LEKGAAAWDW ASTAKNNDEA EVVLAAAGDV PTQEIMAASD KLKELGVKFK VVNVADLLSL QSAKENDEAL TDEEFADIFT ADKPVLFAYH SYAHDVRGLI YDRPNHDNFN VHGYEEEGST TTPYDMVRVN RIDRYELTAE ALRMIDADKY ADKIDELEKF RDEAFQFAVD NGYDHPDYTD WVYSGVNTDK KGAVTATAAT AGDNE
|
| |