| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0616 |
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| Symbol | alaS |
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| ID | 6363862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 704805 |
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| End bp | 707486 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642679774 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001954560 |
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| Protein GI | 189439479 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTG CGGACATCGC AAAGCGATAC CTCGATTATT TTGCCAAGCA CGACCATCTC
ATCGTGCCCT CGGCATCCCT GATTTCCCCG AACCCCACCA CGCTTTTCAC CATCGCCGGC
ATGGTGCCGT TCATCCCGTA CCTGATGGGT GAGCAGACCC CGCCGAAGCG CCGCATGGCC
TCCAACCAGA AGTGCGTGCG TACGCTCGAC ATCGACGAGG TCGGCAAGAC CACCCGCCAC
GGCACCTTCT TCCAGATGCT CGGCAACTTC TCCTTCGGCG ACTACTTCAA GGAAGAGGCC
ATCCACTACG CCTGGGAGCT GCTCACCACC TCGCAGGATG AGGGCGGCTA CGGCTTCGAC
CCCGAGAAGC TGTGGATGAC CACGTTCACC GACGATGACG AAGCCCGTTC CATGTGGATC
AACGAGGGCG TGGACCCCGA GCACATCCAG AAGATGGGCA TGGAAGACAA CTTTTGGACC
ACCGGTGGCC CCGGACCCGG CGGCCCCTGC TCCGAAATCT ACGTGGACCG CGGCCCCGCC
TTCGGCAAGG AAGGCGGCCC GATTGCCGAC GAGAACCGCT ACATCGAGAT CTGGGACCTC
GTGTTCGAGA ACTACGAGGT CGACAACGTC AAGTCCAAGA CCGACCTGCA CATCGTGGGC
GAGCTTGAGA ACAAGAACAT CGATACCGGT GCCGGCTTGG AACGTCTGGC CTACCTGCTG
CAGGGCAAGA ACAACATCTA CGAGACCGAT GAGGTCTTCC CGGTCATCGA GGCCGCCGAG
CAGCTCTCCG GCCTGAAGTA CGGCGAGAAC GAGGACGCCG ACGTGCGCTT CCGCGTGGTC
GCTGACCACG TGCGCTCCGC CCTGATGATC ATGTCCGACG GCGTGCGCCC GTCCAACGTG
GGCCGTGGCT ACGTGCTGCG CCGCCTGCTG CGCCGCACCG TGCGCTCCAT GCGCATGCTC
GGCGTGACCG ATCCGGTGCT GCCCACCCTC TTCCCGACCT CCAAGGCCGC CATGGAGGCC
AGCTACCCGG AGCTCAACGA CACCTTCCAT GAGGTGTCCG AATCCGCGTA TGGCGAGGAA
GACGCCTTCC GCCGCACCCT TGAGACCGGC ACCACGATTC TCGACGTGGC CGTCAACAAG
GCCAAGAGCG ATTCCGCCGA GCCCGTCGTG GCCGGCGAGG ACGCCTTCAA GCTGCACGAC
ACCTACGGCT TCCCGATTGA GCTGACCCTC GAGATGGCCG CCGAACAGGG CGTGAAGGTG
GACGAGGCCA AGTTCCGCGA ACTCATGGCC GAGCAGAAGT CCCGCGCCCG CGCCGACGCC
CTCAAGAAGC GTCACAACGT GGATCTTTCC GTTTACGACG ACTTCAAGAA GACGCTCGTC
AGCCCGATCG ACTTCCTCGG CTACACCGAC ATGTCCGCCC GCGCCAAGGT GATCGGCATC
ATGCAGGAAG GCAAGGGTTC CGTGCCCGCC GTGACCGGCC CGGCCAACGT CGAGGTCATC
CTCGACCGCA CCCCGTTCTA CGCGGAGGCC GGCGGCCAGC TCGCCGACCA GGGCGAGATC
CTGTCCGACG ACGGCGCCGT GCTCGAAGTC GACGATGTGC AGAAGCCCAT CAAGGACCTC
ATCGTCCACC AGTGCCGTCT GACCGAAGGC ACGCTGGTCG TCGGCGCCGA AGTCAACGCC
AACATCGACC TGGCCCGCCG TGGCGCCATC GCCCGCTCGC ACACCGCCAC GCACATGGTG
CACAAGGCGC TGCGTGAGGA GCTGGGCCCG CAGGCCACCC AGCGCGGCTC CGAAGACGCC
CCGAACCGTC TGCGCTTCGA CTTCCAGTGG TCCAAGGCCC CGGCCAAGTC CGTGATCTCC
GCAGTCGAGG AGCGCGTCAA CGACAAGCTG CGCGACAACC TCGCCGTGAC CACCAAGGAA
ATGAAGTTCG ACGACGCCAT CGCCCTCGGT GCCATGCACC TGTTCGGCGA GAAGTACGGC
GACATCGTAC GCGTGGTCTC CATCGGCGAA GACGGCTGGA GCCGCGAGCT GTGTGGTGGT
ACCCACGTGG ACCACGTTGG CAAGATCGGC ATGGTCAACA TCCTGTCCGA AGCCTCCATC
GGCTCCGGCG TGCGTCGTGT CGACGCCGTC GTGGGCCAGG GTGCCTATGA CTTCAACGCT
CGTGAGCACG CGCTGGTCTC CCAGCTGTCC GACAAGCTCA ACGCTCGTCC GGACGAGCTC
GCCGAGCGTG TGAACGCCCT GCTCGCCAAG CTCAAGGAAT CCGATCGTCG CTTGGCCTCC
ATGTACGAGT CCCAGCTGGC CGCCTCGGTT CCGGCGCTGG TTGCTGACAC CAAGAACTCC
GCGGCCCCGG TCAAGGTGGC CGTCAAGAAC GTGGGCCACT TTGGCGCGGT CGATGCCCTG
CGCAAGACCG TACTCGACGT GCGCGCCCAG CTCGGTGAAG ACGCCCCCGT GGTGGTGGCC
CTTGCCGGCG TGAACGAGGA TGACAAGCCG ATGGTCGCCG TGGCCACCAA CGAGGCCGCC
CGCAAGGCCG GCATCAAGGC CGGTGATCTG GTGCGTGGCG CAGCCAAGGT CCTCGGCGGC
GGTGGCGGCG GCAAGCCGGA CTTCGCCCAG GGTGGCGGTG TCGATGCCTC CAAGATCGAC
GAGGCCCTCG AAGCGCTCAA GCACGAGGCG CAGAAAGCCT GA
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| Protein sequence | MRTADIAKRY LDYFAKHDHL IVPSASLISP NPTTLFTIAG MVPFIPYLMG EQTPPKRRMA
SNQKCVRTLD IDEVGKTTRH GTFFQMLGNF SFGDYFKEEA IHYAWELLTT SQDEGGYGFD
PEKLWMTTFT DDDEARSMWI NEGVDPEHIQ KMGMEDNFWT TGGPGPGGPC SEIYVDRGPA
FGKEGGPIAD ENRYIEIWDL VFENYEVDNV KSKTDLHIVG ELENKNIDTG AGLERLAYLL
QGKNNIYETD EVFPVIEAAE QLSGLKYGEN EDADVRFRVV ADHVRSALMI MSDGVRPSNV
GRGYVLRRLL RRTVRSMRML GVTDPVLPTL FPTSKAAMEA SYPELNDTFH EVSESAYGEE
DAFRRTLETG TTILDVAVNK AKSDSAEPVV AGEDAFKLHD TYGFPIELTL EMAAEQGVKV
DEAKFRELMA EQKSRARADA LKKRHNVDLS VYDDFKKTLV SPIDFLGYTD MSARAKVIGI
MQEGKGSVPA VTGPANVEVI LDRTPFYAEA GGQLADQGEI LSDDGAVLEV DDVQKPIKDL
IVHQCRLTEG TLVVGAEVNA NIDLARRGAI ARSHTATHMV HKALREELGP QATQRGSEDA
PNRLRFDFQW SKAPAKSVIS AVEERVNDKL RDNLAVTTKE MKFDDAIALG AMHLFGEKYG
DIVRVVSIGE DGWSRELCGG THVDHVGKIG MVNILSEASI GSGVRRVDAV VGQGAYDFNA
REHALVSQLS DKLNARPDEL AERVNALLAK LKESDRRLAS MYESQLAASV PALVADTKNS
AAPVKVAVKN VGHFGAVDAL RKTVLDVRAQ LGEDAPVVVA LAGVNEDDKP MVAVATNEAA
RKAGIKAGDL VRGAAKVLGG GGGGKPDFAQ GGGVDASKID EALEALKHEA QKA
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