| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0603 |
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| Symbol | csdB |
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| ID | 6362738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 688459 |
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| End bp | 689733 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679761 |
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| Product | selenocysteine lyase |
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| Protein accession | YP_001954547 |
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| Protein GI | 189439466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.481618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGATT TTAAGGCGAT TCGGGCGCAG TTCCCGATTC TGGATCAGGA GATTCACGGG
CACCCGCTCG TGTACCTGGA TTCTGCGGCC ACCTCGCAGA AGCCGAATGC GGTGATCGAC
GCCGAGGCGA ACTTCTACCG TACAATTAAC GCCGGCGTGC ACCGTGGTGC GCACGAGCTG
GCCGCCCGTA GCACCATGGC CTTTGAGGAG GCCCGAGCCA AGGTGGCCAA GCTGGTCGGC
GCGAATGCGG CCGAAGGTGA AGAGGAGGTC GTCGTCACCG GTGGTGCCAC GGCCGGACTG
AACCTGCTCG CCACCGCATT CGGCAATGCA TCGCTGGGGC GTGGGGGAGA AGCCGCCAAG
CGTTTTGCCC TGAAGCCGGG CGATGAGATC GTCGTCTCGC GTGCGGAACA TCATTCGGTG
CTGCTGCCGT TCCAGGAGCT GTCCTACCGT ACCGGCGCCA CCTTCAAGTG GATCGACCTG
ACCGAGGACG GCCGTGTGCG TACGGACAAC CTCGACGAAG TCATCACCGA GCGTACCAAG
GTCGTGGCCG TCACCCACGT GGGCAACGCC ACGGGTGCCA TCACCAACAT CGCCCCGATC
ATCAAGCGTG CGCATGAAGT AGGTTCGATC TTCATCTTGG ACGCTTGCCA GTCCGTACCG
CACCTCAAGG TCGATTTCCA CGCGCTTGAT GTGGACTTCG CCGCCTGGAG CGCGCACAAG
ATGTACGGTC CTACCGGCGT CGGTTTCCTG TACGGTAAGC GCGACCTGCT CGAAGCCCTG
CCGCCGGCCA ACTTCGGCGG CTCCATGGTC GAGCTCGCCT ACATGGACCA CGAGGCCCAA
TACATGGCCC CTCCGGCCCG CTTCGAGGCC GGCACCCAGC CGGTCGCCCA AGTGGTGGCC
GCAGGCGTCG CCGCCGAATG GATGATGAAC ATCGGGCTCG AGAACATCGA AGCCCATGAG
AAGACCATCG CCGCCGAACT GCTCAAGCTC GGCGACGTCG ATGGCATTCG CATCCTCGGG
CCGCGCGAAA ACGTGGACCG CATCGGCACC GTGGCGTTCG ACGTGGCCGG CGTGCATCCG
CACGATGTGG GCCAGTTCAT CGACGCCCAG GGCATCGCGA TTCGCGTGGG ACACCACTGT
GCCCAGCCGG TACACCGCCA CTTCGGCCTA TACGCATCCA ACCGTGCCTC CTCCGGTGTC
TACAATTCGG TCGAAGATGC CCAAGCGTTG GTCGAAGCGG CCAAGGGCAT CCGTAAGTTC
TTTGGAGTGG AGTAA
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| Protein sequence | MVDFKAIRAQ FPILDQEIHG HPLVYLDSAA TSQKPNAVID AEANFYRTIN AGVHRGAHEL
AARSTMAFEE ARAKVAKLVG ANAAEGEEEV VVTGGATAGL NLLATAFGNA SLGRGGEAAK
RFALKPGDEI VVSRAEHHSV LLPFQELSYR TGATFKWIDL TEDGRVRTDN LDEVITERTK
VVAVTHVGNA TGAITNIAPI IKRAHEVGSI FILDACQSVP HLKVDFHALD VDFAAWSAHK
MYGPTGVGFL YGKRDLLEAL PPANFGGSMV ELAYMDHEAQ YMAPPARFEA GTQPVAQVVA
AGVAAEWMMN IGLENIEAHE KTIAAELLKL GDVDGIRILG PRENVDRIGT VAFDVAGVHP
HDVGQFIDAQ GIAIRVGHHC AQPVHRHFGL YASNRASSGV YNSVEDAQAL VEAAKGIRKF
FGVE
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