| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0522 |
|---|
| Symbol | |
|---|
| ID | 6363876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 598261 |
|---|
| End bp | 599451 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642679679 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_001954466 |
|---|
| Protein GI | 189439385 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.138181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATG AGGAATACAA GGCCATGCTT GGCGGCAAGT CCGTGATTCG CGAGCTGAGC
GAGTACGCCA CGAGCCGCGG TGCCGAAATC GGCTACCAGA ACGTGTTCGA TTACAGCCTT
GGCAATCCCT CGGTGCCGGC TCCGAAATCC TTCACCGACG CCATGGTCGA CCTCTACGAA
AACGGCGATC CGGTGGCCAT CCACGGCTAC TCCCCCTCGC TCGGTATCCC ATCCGTCAAG
GACGCGATCG CCGAAAACCT CAACGAACGT TTCGGCATGG CATACACCGG CAACCACATC
TTCCCGACCA CGGGCGCGGC GGGCGCGCTG TCCCACGCGA TGCGTGCGGT GACCAAGCCG
GGCGATGAGA TCATCACCTT CGCCCCCTAC TTCCCCGAAT ACCAGCCGTA CGTCAAGGGC
GCCGGCGCCA AGCTGACCAT CGTGCCGGCC GACACCGAGA ACTTCCAAAT CAACTTCGAC
GCATTCGAGG CTGCACTTAA CCCGAACGTG CAGGTCGTGC TTATCAACAC CCCGAACAAC
CCGTCCGGCG CGGTGTATTC AGCGGACACG CTCAAGCGTC TGGCCGCGAT CCTGACCGCC
AAGCAGGTCG AATACGGCCA CGATATCTTC CTGATCAGCG ACGAACCGTA CCGCGAAATC
GTGTTCGACG GCGCCACCCA GCCCTACCCG GCCAGCTTCT ACGCGAACTC GCTGACCTGC
TACTCGTGGT CGAAGTCGCT GAGCCTGCCT GGCGAACGCA TCGGCTATGT CGCGGTGAAT
CCCACAGCCA CCGACGCCGA CCTGCTCGTG CCCATGATGG GCCAGATCTC GCGCGGCACC
GGCCACAACT GCCCGCCGAG CTCGATTCAG CTGGGCGTGG CCAAGGTCAT CGACCAGACC
GCCGATCTCA ACGTCTACGA GACGAACATG AACCTGCTCT ACGATGCGCT GACCGGCATC
GGCTTCGACG TGGTACGCCC CGGCGGCACG TTCTACATCT TCCCCAAGGC GCTGGAGGAC
GACGCCGTGG CGTTCTGCAT GAAGGCCAAG GAATACGACC TGATTCTTGT GCCGTCCGAC
AGCTTCGGCG TGCCCGGATA CTTCCGCATG GCCTACTGCA TCGACACGGA GAAGGTCAAG
CGCTCGATCC CCGTGTTCGA AAAGTTCGCC CACGAGGTGT ACGGCCTGTA A
|
|---|
| Protein sequence | MINEEYKAML GGKSVIRELS EYATSRGAEI GYQNVFDYSL GNPSVPAPKS FTDAMVDLYE
NGDPVAIHGY SPSLGIPSVK DAIAENLNER FGMAYTGNHI FPTTGAAGAL SHAMRAVTKP
GDEIITFAPY FPEYQPYVKG AGAKLTIVPA DTENFQINFD AFEAALNPNV QVVLINTPNN
PSGAVYSADT LKRLAAILTA KQVEYGHDIF LISDEPYREI VFDGATQPYP ASFYANSLTC
YSWSKSLSLP GERIGYVAVN PTATDADLLV PMMGQISRGT GHNCPPSSIQ LGVAKVIDQT
ADLNVYETNM NLLYDALTGI GFDVVRPGGT FYIFPKALED DAVAFCMKAK EYDLILVPSD
SFGVPGYFRM AYCIDTEKVK RSIPVFEKFA HEVYGL
|
|---|
| |